Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT40Q6A162 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.89□□□□□ -1.95
KRT40Q6A162 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KRT40Q6A162 RNA5SP456-201ENST00000364002 114 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 Y_RNA.243-201ENST00000364481 109 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 Y_RNA.304-201ENST00000365011 112 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 Y_RNA.361-201ENST00000365515 120 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 RNU6-1083P-201ENST00000384022 107 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 MIR27B-201ENST00000385129 97 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 AL031003.1-201ENST00000404229 172 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.88□□□□□ -1.95
KRT40Q6A162 UBBP3-201ENST00000445497 241 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.88□□□□□ -1.95
KRT40Q6A162 AC140059.1-201ENST00000489238 361 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
KRT40Q6A162 RNU6-548P-201ENST00000517083 115 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 SCARNA11.3-201ENST00000517276 130 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 IGKV3-31-201ENST00000523109 329 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 AL713866.2-201ENST00000603579 219 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 AL365265.1-201ENST00000621045 234 ntBASIC2.88□□□□□ -1.95
KRT40Q6A162 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.88□□□□□ -1.95
KRT40Q6A162 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KRT40Q6A162 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KRT40Q6A162 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRT40Q6A162 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRT40Q6A162 SNORA25.6-201ENST00000364121 118 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 Y_RNA.308-201ENST00000365043 101 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 RNU6-1027P-201ENST00000383998 107 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 BTF3P11-201ENST00000426582 477 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 TOMM22P2-201ENST00000430735 237 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 Z96811.1-201ENST00000445880 108 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 NDUFB4P10-201ENST00000452541 359 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 HMGN2P9-201ENST00000476875 229 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 RNA5SP112-201ENST00000515937 99 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 DEFB122-202ENST00000569013 197 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 AC072026.1-201ENST00000605023 201 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 AC090517.3-201ENST00000625170 141 ntBASIC2.87□□□□□ -1.95
KRT40Q6A162 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KRT40Q6A162 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRT40Q6A162 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KRT40Q6A162 U3.8-201ENST00000363675 217 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 RNU6-324P-201ENST00000363957 106 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 RNU6-801P-201ENST00000364087 105 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 SNORD56.5-201ENST00000364281 72 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 Y_RNA.233-201ENST00000364407 101 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 MIR518C-201ENST00000384822 101 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 MIR29B2-201ENST00000385055 81 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 RNU4-53P-201ENST00000410828 140 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 AC024067.1-201ENST00000426199 223 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 RPL30P4-201ENST00000429309 333 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 RPS29P12-201ENST00000460178 152 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 HMGB3P3-201ENST00000510526 400 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 RNU6-826P-201ENST00000516827 104 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.86□□□□□ -1.95
KRT40Q6A162 AC004486.1-201ENST00000546846 233 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 AL137100.2-201ENST00000555786 315 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 MIR3670-2-201ENST00000582974 65 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 MIR3670-1-201ENST00000584160 65 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 MIR3670-3-201ENST00000584855 65 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 AC008739.2-201ENST00000597006 317 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 AC006380.1-201ENST00000603598 186 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.86□□□□□ -1.95
KRT40Q6A162 MIR3670-4-201ENST00000612260 65 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 U6.115-201ENST00000636045 103 ntBASIC2.86□□□□□ -1.95
KRT40Q6A162 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
KRT40Q6A162 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.85□□□□□ -1.95
KRT40Q6A162 RNU6-486P-201ENST00000363116 107 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 DEFA7P-201ENST00000382676 285 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 MIR586-201ENST00000385035 97 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 RNU6-763P-201ENST00000390865 106 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 SNORA26.5-201ENST00000391215 123 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 RN7SKP223-201ENST00000410582 62 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 RPS12P2-201ENST00000439728 269 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 U8.19-201ENST00000459095 133 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.85□□□□□ -1.95
KRT40Q6A162 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.85□□□□□ -1.95
KRT40Q6A162 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KRT40Q6A162 ATP5EP1-201ENST00000510257 156 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 RNU6-1219P-201ENST00000516143 112 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 MIR4648-201ENST00000580107 72 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 AL670379.2-201ENST00000604983 252 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.85□□□□□ -1.95
KRT40Q6A162 CTSLP2-204ENST00000629029 392 ntBASIC2.85□□□□□ -1.95
KRT40Q6A162 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KRT40Q6A162 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
KRT40Q6A162 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
KRT40Q6A162 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
KRT40Q6A162 RNU6-1305P-201ENST00000364353 104 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 Y_RNA.240-201ENST00000364469 95 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 Y_RNA.262-201ENST00000364641 102 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 Y_RNA.435-201ENST00000384095 112 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 RNU6-187P-201ENST00000384139 106 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 RNU6-482P-201ENST00000391068 107 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 RN7SKP192-201ENST00000411291 327 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 HMGN2P3-201ENST00000433603 273 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 HMGN2P5-201ENST00000436882 273 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms