Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 RNU6-653P-201ENST00000363074 106 ntBASIC3.16□□□□□ -1.9
ZNF394Q53GI3 SNORA38-201ENST00000363946 132 ntBASIC3.16□□□□□ -1.9
ZNF394Q53GI3 Y_RNA.270-201ENST00000364693 104 ntBASIC3.16□□□□□ -1.9
ZNF394Q53GI3 RNU6-144P-201ENST00000383951 107 ntBASIC3.16□□□□□ -1.9
ZNF394Q53GI3 RNU4-70P-201ENST00000384579 139 ntBASIC3.16□□□□□ -1.9
ZNF394Q53GI3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF394Q53GI3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.16□□□□□ -1.9
ZNF394Q53GI3 AC091953.5-201ENST00000622919 233 ntBASIC3.16□□□□□ -1.9
ZNF394Q53GI3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF394Q53GI3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
ZNF394Q53GI3 RNU6-1323P-201ENST00000384025 107 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 MIR518C-201ENST00000384822 101 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 AC104332.1-201ENST00000440471 797 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 RNU7-26P-201ENST00000458980 63 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 U8.19-201ENST00000459095 133 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 AC011406.1-201ENST00000512440 370 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 SNORA74D-201ENST00000516404 141 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 AC027419.1-201ENST00000522976 328 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 CYCSP26-201ENST00000534107 320 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 MIR4438-201ENST00000585271 93 ntBASIC3.15□□□□□ -1.91
ZNF394Q53GI3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ZNF394Q53GI3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF394Q53GI3 snoU2-30.2-201ENST00000362805 70 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 RNU4-17P-201ENST00000365598 141 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 MIR29C-201ENST00000385231 88 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 MTCO2P33-201ENST00000402100 465 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 AC060773.1-201ENST00000421698 310 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF394Q53GI3 HSPE1P21-201ENST00000438283 308 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 RNU7-141P-201ENST00000459304 62 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 AC010409.1-201ENST00000487382 476 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 AC097462.1-201ENST00000514125 324 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 AC100767.1-201ENST00000528178 123 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 AC005972.2-201ENST00000604690 348 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 AC004832.4-201ENST00000608952 331 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF394Q53GI3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF394Q53GI3 AC093831.2-201ENST00000624393 3427 ntBASIC3.14□□□□□ -1.91
ZNF394Q53GI3 RNU1-22P-201ENST00000363334 158 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 RNU6-1205P-201ENST00000363625 106 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 Y_RNA.180-201ENST00000363867 113 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 Y_RNA.308-201ENST00000365043 101 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 MIR1262-201ENST00000408276 93 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 RPL39P40-201ENST00000445481 146 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF394Q53GI3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.13□□□□□ -1.91
ZNF394Q53GI3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 AP003357.1-201ENST00000604497 148 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF394Q53GI3 MIR548AY-201ENST00000617669 107 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 U6.73-201ENST00000619194 103 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 AP006437.1-201ENST00000641440 3685 ntBASIC3.13□□□□□ -1.91
ZNF394Q53GI3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ZNF394Q53GI3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF394Q53GI3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF394Q53GI3 AC009487.2-201ENST00000420969 6821 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 AL356292.1-201ENST00000283110 373 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 RNU6-117P-201ENST00000365415 107 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 SNORA8.3-201ENST00000384679 139 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 RNU6-443P-201ENST00000384780 107 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 MIR515-2-201ENST00000384883 83 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 MIR515-1-201ENST00000384884 83 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 MIR526A2-201ENST00000390198 65 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 RNU6-918P-201ENST00000391219 106 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 HMGN2P34-201ENST00000437647 269 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 S100A11P2-201ENST00000467589 312 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 RPS29P21-201ENST00000496272 170 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 RNU7-115P-201ENST00000516433 55 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 AC068647.2-201ENST00000637380 353 ntBASIC3.12□□□□□ -1.91
ZNF394Q53GI3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF394Q53GI3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF394Q53GI3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF394Q53GI3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF394Q53GI3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
ZNF394Q53GI3 Y_RNA.233-201ENST00000364407 101 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 Y_RNA.293-201ENST00000364908 93 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 SNORD116-13-201ENST00000384408 92 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 AL135786.1-201ENST00000415892 214 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 AL162725.1-201ENST00000435405 301 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.11□□□□□ -1.91
ZNF394Q53GI3 RNU7-172P-201ENST00000517125 64 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF394Q53GI3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF394Q53GI3 MIR3126-201ENST00000577443 74 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 AC007229.1-201ENST00000590455 412 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 RPL12P50-201ENST00000603116 116 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 AC005000.2-201ENST00000605468 310 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
ZNF394Q53GI3 Y_RNA.802-201ENST00000614892 130 ntBASIC3.11□□□□□ -1.91
ZNF394Q53GI3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ZNF394Q53GI3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms