Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.5□□□□□ -1.85
GRIK1P39086 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GRIK1P39086 Y_RNA.52-201ENST00000362760 96 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 Y_RNA.85-201ENST00000363014 111 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 MIR634-201ENST00000385208 97 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 SNORD12C-201ENST00000386307 89 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 NDUFB4P4-201ENST00000404822 243 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 RPL23AP54-201ENST00000495129 419 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 RN7SKP43-201ENST00000516173 320 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 RNU2-44P-201ENST00000516795 194 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 MIR5680-201ENST00000577577 84 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 AC007496.3-201ENST00000624987 3443 ntBASIC3.5□□□□□ -1.85
GRIK1P39086 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GRIK1P39086 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GRIK1P39086 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GRIK1P39086 AC091564.4-201ENST00000533934 2194 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 RNU4-41P-201ENST00000364426 143 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 SNORD18B-201ENST00000365659 72 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 MIR147B-201ENST00000390185 80 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
GRIK1P39086 RNU6-440P-201ENST00000390882 105 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 RPL39P40-201ENST00000445481 146 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 RNU6-437P-201ENST00000459408 95 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.49□□□□□ -1.85
GRIK1P39086 RNU6-109P-201ENST00000516364 107 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 RNU6-184P-201ENST00000516514 107 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.49□□□□□ -1.85
GRIK1P39086 AC007012.1-201ENST00000567192 175 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 YPEL5P2-201ENST00000605553 359 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 AL035470.1-201ENST00000622571 220 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 SNORA50A-202ENST00000629536 136 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
GRIK1P39086 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.49□□□□□ -1.85
GRIK1P39086 MAPK10-362ENST00000641864 4484 ntBASIC3.49□□□□□ -1.85
GRIK1P39086 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
GRIK1P39086 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
GRIK1P39086 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
GRIK1P39086 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.48□□□□□ -1.85
GRIK1P39086 AC058791.1-201ENST00000608412 3198 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 RNA5SP125-201ENST00000364843 120 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 RNU6-1080P-201ENST00000383982 107 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 SNORA48.2-201ENST00000390926 124 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 AL590004.2-201ENST00000404787 371 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 AL139281.1-201ENST00000422120 335 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 CALM2P4-201ENST00000430810 426 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 Z75741.1-201ENST00000446793 314 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 RPL23AP7-203ENST00000449021 469 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 CENPBD1P1-201ENST00000464061 469 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 AC010531.2-201ENST00000465012 153 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 AC006483.1-201ENST00000487308 313 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 SNORA70.12-201ENST00000516084 153 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 RNU6-63P-201ENST00000516690 95 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 EIF4A1P12-201ENST00000551910 141 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GRIK1P39086 uc_338.1-201ENST00000612113 180 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 AC002543.1-201ENST00000299783 1954 ntBASIC3.48□□□□□ -1.85
GRIK1P39086 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
GRIK1P39086 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GRIK1P39086 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GRIK1P39086 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GRIK1P39086 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.48□□□□□ -1.85
GRIK1P39086 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GRIK1P39086 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GRIK1P39086 U3.8-201ENST00000363675 217 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 Y_RNA.528-201ENST00000384575 108 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 SNORA12-201ENST00000391162 147 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 AL121890.1-201ENST00000435457 205 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.47□□□□□ -1.85
GRIK1P39086 ATP5EP1-201ENST00000510257 156 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 RN7SKP12-201ENST00000516275 143 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 RNU6-1299P-201ENST00000516316 100 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 RNU6-412P-201ENST00000516434 106 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.47□□□□□ -1.85
GRIK1P39086 AL442128.1-201ENST00000615151 90 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
GRIK1P39086 MIR8057-201ENST00000620957 69 ntBASIC3.47□□□□□ -1.85
GRIK1P39086 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.47□□□□□ -1.85
GRIK1P39086 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
GRIK1P39086 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
GRIK1P39086 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.46□□□□□ -1.86
GRIK1P39086 AL356292.1-201ENST00000283110 373 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GRIK1P39086 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GRIK1P39086 AP002088.1-201ENST00000382740 395 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 CD24P4-201ENST00000382840 243 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 MIR128-1-201ENST00000384921 82 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 CYCSP48-201ENST00000417124 323 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.46□□□□□ -1.86
GRIK1P39086 RPS27P29-201ENST00000463110 252 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 RPS29P2-201ENST00000479278 136 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 AC145146.1-201ENST00000496370 254 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 SNORA40.13-201ENST00000516379 120 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.46□□□□□ -1.86
GRIK1P39086 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 uc_338.14-201ENST00000613162 166 ntBASIC3.46□□□□□ -1.86
GRIK1P39086 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms