Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 UQCRHP3-201ENST00000451503 251 ntBASIC2.88□□□□□ -1.95
KLF4O43474 U8.19-201ENST00000459095 133 ntBASIC2.88□□□□□ -1.95
KLF4O43474 RNU7-141P-201ENST00000459304 62 ntBASIC2.88□□□□□ -1.95
KLF4O43474 AL049873.1-201ENST00000480540 376 ntBASIC2.88□□□□□ -1.95
KLF4O43474 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.88□□□□□ -1.95
KLF4O43474 SNORA81.3-201ENST00000517283 198 ntBASIC2.88□□□□□ -1.95
KLF4O43474 AC024995.1-201ENST00000523014 93 ntBASIC2.88□□□□□ -1.95
KLF4O43474 POLR3GP1-201ENST00000594073 261 ntBASIC2.88□□□□□ -1.95
KLF4O43474 AC022202.1-201ENST00000613515 211 ntBASIC2.88□□□□□ -1.95
KLF4O43474 MIR548AY-201ENST00000617669 107 ntBASIC2.88□□□□□ -1.95
KLF4O43474 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.88□□□□□ -1.95
KLF4O43474 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
KLF4O43474 AL161431.1-201ENST00000618966 4205 ntBASIC2.87□□□□□ -1.95
KLF4O43474 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KLF4O43474 AC134026.1-201ENST00000623249 2239 ntBASIC2.87□□□□□ -1.95
KLF4O43474 RNU1-96P-201ENST00000364163 162 ntBASIC2.87□□□□□ -1.95
KLF4O43474 AL135786.1-201ENST00000415892 214 ntBASIC2.87□□□□□ -1.95
KLF4O43474 EBAG9P1-201ENST00000418955 543 ntBASIC2.87□□□□□ -1.95
KLF4O43474 AL162725.1-201ENST00000435405 301 ntBASIC2.87□□□□□ -1.95
KLF4O43474 AL135790.2-201ENST00000437701 267 ntBASIC2.87□□□□□ -1.95
KLF4O43474 AC104332.1-201ENST00000440471 797 ntBASIC2.87□□□□□ -1.95
KLF4O43474 Y_RNA.644-201ENST00000459006 113 ntBASIC2.87□□□□□ -1.95
KLF4O43474 Y_RNA.674-201ENST00000516362 113 ntBASIC2.87□□□□□ -1.95
KLF4O43474 MIR3169-201ENST00000578032 83 ntBASIC2.87□□□□□ -1.95
KLF4O43474 AC004832.4-201ENST00000608952 331 ntBASIC2.87□□□□□ -1.95
KLF4O43474 AL365265.1-201ENST00000621045 234 ntBASIC2.87□□□□□ -1.95
KLF4O43474 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KLF4O43474 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KLF4O43474 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KLF4O43474 RNU6-1020P-201ENST00000363684 107 ntBASIC2.86□□□□□ -1.95
KLF4O43474 Y_RNA.274-201ENST00000364714 101 ntBASIC2.86□□□□□ -1.95
KLF4O43474 SNORD116-13-201ENST00000384408 92 ntBASIC2.86□□□□□ -1.95
KLF4O43474 MIR562-201ENST00000384894 95 ntBASIC2.86□□□□□ -1.95
KLF4O43474 RNU11-3P-201ENST00000391111 133 ntBASIC2.86□□□□□ -1.95
KLF4O43474 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.86□□□□□ -1.95
KLF4O43474 AC117454.1-201ENST00000491120 168 ntBASIC2.86□□□□□ -1.95
KLF4O43474 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.86□□□□□ -1.95
KLF4O43474 RNU7-115P-201ENST00000516433 55 ntBASIC2.86□□□□□ -1.95
KLF4O43474 RNU6-63P-201ENST00000516690 95 ntBASIC2.86□□□□□ -1.95
KLF4O43474 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.86□□□□□ -1.95
KLF4O43474 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.86□□□□□ -1.95
KLF4O43474 AC024405.2-202ENST00000532731 184 ntBASIC2.86□□□□□ -1.95
KLF4O43474 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.86□□□□□ -1.95
KLF4O43474 MIR4325-201ENST00000583049 90 ntBASIC2.86□□□□□ -1.95
KLF4O43474 AP003357.1-201ENST00000604497 148 ntBASIC2.86□□□□□ -1.95
KLF4O43474 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.86□□□□□ -1.95
KLF4O43474 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.86□□□□□ -1.95
KLF4O43474 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.86□□□□□ -1.95
KLF4O43474 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.86□□□□□ -1.95
KLF4O43474 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.85□□□□□ -1.95
KLF4O43474 RNU6-117P-201ENST00000365415 107 ntBASIC2.85□□□□□ -1.95
KLF4O43474 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KLF4O43474 SNORA8.3-201ENST00000384679 139 ntBASIC2.85□□□□□ -1.95
KLF4O43474 MIR520G-201ENST00000385064 90 ntBASIC2.85□□□□□ -1.95
KLF4O43474 RNA5SP465-201ENST00000391195 109 ntBASIC2.85□□□□□ -1.95
KLF4O43474 RNA5SP511-201ENST00000410487 115 ntBASIC2.85□□□□□ -1.95
KLF4O43474 RNU7-94P-201ENST00000459576 63 ntBASIC2.85□□□□□ -1.95
KLF4O43474 S100A11P2-201ENST00000467589 312 ntBASIC2.85□□□□□ -1.95
KLF4O43474 AC109925.1-201ENST00000478069 331 ntBASIC2.85□□□□□ -1.95
KLF4O43474 SCARNA13-201ENST00000516672 275 ntBASIC2.85□□□□□ -1.95
KLF4O43474 MIR5688-201ENST00000580619 83 ntBASIC2.85□□□□□ -1.95
KLF4O43474 Y_RNA.802-201ENST00000614892 130 ntBASIC2.85□□□□□ -1.95
KLF4O43474 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
KLF4O43474 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
KLF4O43474 RNU6-862P-201ENST00000362804 105 ntBASIC2.84□□□□□ -1.95
KLF4O43474 Y_RNA.172-201ENST00000363765 102 ntBASIC2.84□□□□□ -1.95
KLF4O43474 RNU6-1048P-201ENST00000364054 107 ntBASIC2.84□□□□□ -1.95
KLF4O43474 U8.7-201ENST00000364940 136 ntBASIC2.84□□□□□ -1.95
KLF4O43474 DYNLT3P1-201ENST00000378574 347 ntBASIC2.84□□□□□ -1.95
KLF4O43474 RNU6-136P-201ENST00000384663 107 ntBASIC2.84□□□□□ -1.95
KLF4O43474 MIR634-201ENST00000385208 97 ntBASIC2.84□□□□□ -1.95
KLF4O43474 RNA5SP467-201ENST00000391274 118 ntBASIC2.84□□□□□ -1.95
KLF4O43474 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.84□□□□□ -1.95
KLF4O43474 RN7SKP43-201ENST00000516173 320 ntBASIC2.84□□□□□ -1.95
KLF4O43474 AC022080.3-201ENST00000544433 482 ntBASIC2.84□□□□□ -1.95
KLF4O43474 AC015720.1-201ENST00000565251 277 ntBASIC2.84□□□□□ -1.95
KLF4O43474 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.84□□□□□ -1.95
KLF4O43474 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
KLF4O43474 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.83□□□□□ -1.96
KLF4O43474 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KLF4O43474 Y_RNA.111-201ENST00000363248 100 ntBASIC2.83□□□□□ -1.96
KLF4O43474 Y_RNA.308-201ENST00000365043 101 ntBASIC2.83□□□□□ -1.96
KLF4O43474 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.83□□□□□ -1.96
KLF4O43474 SNORA72-201ENST00000384339 132 ntBASIC2.83□□□□□ -1.96
KLF4O43474 SNORA8-201ENST00000384574 139 ntBASIC2.83□□□□□ -1.96
KLF4O43474 SNORA36B-201ENST00000410438 131 ntBASIC2.83□□□□□ -1.96
KLF4O43474 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
KLF4O43474 RPL23AP54-201ENST00000495129 419 ntBASIC2.83□□□□□ -1.96
KLF4O43474 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.83□□□□□ -1.96
KLF4O43474 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.83□□□□□ -1.96
KLF4O43474 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.83□□□□□ -1.96
KLF4O43474 MIR4724-201ENST00000579485 89 ntBASIC2.83□□□□□ -1.96
KLF4O43474 AC073413.2-201ENST00000604332 360 ntBASIC2.83□□□□□ -1.96
KLF4O43474 AC011921.3-201ENST00000605540 361 ntBASIC2.83□□□□□ -1.96
KLF4O43474 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KLF4O43474 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KLF4O43474 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
KLF4O43474 AL035425.3-201ENST00000564206 4996 ntBASIC2.82□□□□□ -1.96
KLF4O43474 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KLF4O43474 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms