Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RPL36AP48-201ENST00000485521 314 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 RPS23P4-201ENST00000487908 423 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 AC242852.1-201ENST00000612151 96 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 AL591424.2-201ENST00000617023 128 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 AC244015.1-201ENST00000622301 99 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 AC000123.3-201ENST00000624029 4975 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 ZNF962P-201ENST00000443465 3140 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 Y_RNA.37-201ENST00000362606 108 ntBASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 Y_RNA.545-201ENST00000384652 105 ntBASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 MIR483-201ENST00000385070 76 ntBASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC61Q9Y6R9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CCDC61Q9Y6R9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC61Q9Y6R9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CCDC61Q9Y6R9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC61Q9Y6R9 RNU6-525P-201ENST00000363685 104 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 RNU6-1229P-201ENST00000364295 107 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 SNORA14A-201ENST00000364773 135 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 SNORD58A-201ENST00000383875 65 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 Y_RNA.440-201ENST00000384120 114 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 SNORA7.5-201ENST00000410672 110 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 AC069285.2-201ENST00000440210 275 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 AC114801.3-201ENST00000510231 177 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 RNU6-513P-201ENST00000516104 104 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 SNORA74D-201ENST00000516404 141 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 AC079598.5-201ENST00000547460 117 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 MIR3609-201ENST00000582661 80 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 MIR4712-201ENST00000583750 82 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 AL513534.2-201ENST00000603836 250 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 AC096720.1-201ENST00000604441 183 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 AC090517.3-201ENST00000625170 141 ntBASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC61Q9Y6R9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 RNU6-633P-201ENST00000362612 103 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 Y_RNA.430-201ENST00000384081 110 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 RNA5SP129-201ENST00000410276 118 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 snoU13.28-201ENST00000459235 104 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 RPL23AP63-201ENST00000498752 471 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 SNORA18.7-201ENST00000516910 131 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 SNORA70.24-201ENST00000517233 118 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 AC069240.1-201ENST00000548774 375 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 AC233702.9-201ENST00000581528 203 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 MIR4439-201ENST00000583746 80 ntBASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC61Q9Y6R9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 MFSD8-236ENST00000641509 4050 ntBASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 RNU4-16P-201ENST00000364737 141 ntBASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 MIR490-201ENST00000384865 128 ntBASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 RNU6-679P-201ENST00000391003 106 ntBASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 CYCSP35-201ENST00000451978 304 ntBASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 SNRPGP5-201ENST00000456003 220 ntBASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 AL137849.1-201ENST00000604767 169 ntBASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 AC091932.4-201ENST00000623386 200 ntBASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC61Q9Y6R9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 MIR126-201ENST00000362291 85 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 SNORD9-201ENST00000362566 104 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 RNU6-438P-201ENST00000365561 103 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 MIR607-201ENST00000385241 96 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 NDUFB4P4-201ENST00000404822 243 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 AL022718.1-201ENST00000412004 84 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 SNORD36C-201ENST00000516733 66 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 MIR5195-201ENST00000583555 115 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms