Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNA5SP393-201ENST00000363423 117 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.569-201ENST00000384749 103 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR1253-201ENST00000408273 105 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU4-30P-201ENST00000410245 143 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.618-201ENST00000410949 107 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 AC098869.1-201ENST00000481627 292 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 RN7SL636P-201ENST00000497504 294 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 SUMO2P18-201ENST00000518873 252 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 AL031274.2-201ENST00000599419 203 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 AC005828.6-201ENST00000606610 232 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-324P-201ENST00000363957 106 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.512-201ENST00000384518 102 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.518-201ENST00000384552 113 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR1262-201ENST00000408276 93 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 U3.40-201ENST00000408706 208 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 AL353689.1-201ENST00000438895 199 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 HSPE1P25-201ENST00000455484 251 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 HMGB3P17-201ENST00000504195 649 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU2-31P-201ENST00000516954 155 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-570P-201ENST00000517051 105 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR3124-201ENST00000582636 67 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHGA3Q9Y5H0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.383-201ENST00000383855 97 ntBASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-1199P-201ENST00000411249 104 ntBASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 OOSP1P1-201ENST00000423265 274 ntBASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA3Q9Y5H0 AL391987.6-201ENST00000305671 199 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.136-201ENST00000363444 102 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 SNORD115-30-201ENST00000364117 82 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU1-138P-201ENST00000384093 164 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-514P-201ENST00000384208 107 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR512-1-201ENST00000384913 84 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU11-5P-201ENST00000391216 129 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 AL139109.1-201ENST00000455491 297 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 AC096725.1-201ENST00000514266 313 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.668-201ENST00000516233 93 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-1338P-201ENST00000516328 91 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 AC062037.2-201ENST00000610137 73 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 AC010615.1-201ENST00000594254 1764 ntBASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PCDHGA3Q9Y5H0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR340-201ENST00000362125 95 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR26A1-201ENST00000362205 77 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 RNA5SP68-201ENST00000363885 119 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-472P-201ENST00000384299 107 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR215-201ENST00000384858 110 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR873-201ENST00000401120 77 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 RNA5SP270-201ENST00000411361 118 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 SUMO1P4-201ENST00000429430 302 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 SNORD65B-201ENST00000459126 73 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-436P-201ENST00000516171 114 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 AL137100.2-201ENST00000555786 315 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 AL353149.1-201ENST00000610667 244 ntBASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PCDHGA3Q9Y5H0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU1-58P-201ENST00000362413 163 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-23P-201ENST00000363283 107 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.396-201ENST00000383949 103 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU1-52P-201ENST00000384190 164 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.541-201ENST00000384640 113 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR515-2-201ENST00000384883 83 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR515-1-201ENST00000384884 83 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 MT-TW-201ENST00000387382 68 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 AL031003.1-201ENST00000404229 172 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 RNA5SP508-201ENST00000411327 119 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 AC011406.1-201ENST00000512440 370 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms