Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 U2.1-201ENST00000618978 145 ntBASIC1.85□□□□□ -2.11
LYSMD4Q5XG99 AC134503.1-201ENST00000633048 54 ntBASIC1.85□□□□□ -2.11
LYSMD4Q5XG99 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
LYSMD4Q5XG99 AC245060.5-201ENST00000610778 3293 ntBASIC1.85□□□□□ -2.11
LYSMD4Q5XG99 Y_RNA.128-201ENST00000363391 112 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 Y_RNA.179-201ENST00000363844 90 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 RNU6-1305P-201ENST00000364353 104 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 BTF3P4-201ENST00000418852 495 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 MTCO1P44-201ENST00000441935 243 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 RNU1-131P-201ENST00000458943 161 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 AC010531.2-201ENST00000465012 153 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 AL163540.1-201ENST00000485382 386 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 AC010469.2-201ENST00000496412 480 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 RNU7-4P-201ENST00000516961 62 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 MIR5188-201ENST00000583467 113 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 MIR8081-201ENST00000611533 95 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 AC011476.5-201ENST00000615594 130 ntBASIC1.84□□□□□ -2.11
LYSMD4Q5XG99 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.84□□□□□ -2.12
LYSMD4Q5XG99 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LYSMD4Q5XG99 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 MTND5P35-201ENST00000557537 1720 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 RNU6-661P-201ENST00000362409 107 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 Y_RNA.645-201ENST00000391229 102 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 RNU6-321P-201ENST00000410912 106 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 Y_RNA.711-201ENST00000516993 102 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 AC144568.1-201ENST00000520139 137 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 AL356055.1-201ENST00000602528 446 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 U1.36-201ENST00000620684 176 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 AL606534.2-204ENST00000635008 178 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 ZNF720P1-201ENST00000562403 1939 ntBASIC1.83□□□□□ -2.12
LYSMD4Q5XG99 Y_RNA.28-201ENST00000362554 111 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 RNU6-280P-201ENST00000364145 104 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 RNU4-76P-201ENST00000364509 141 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 RNU6-793P-201ENST00000384233 104 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 RNU6-1145P-201ENST00000384246 107 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 MIR548B-201ENST00000385247 97 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 RNA5SP212-201ENST00000391223 107 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AL021397.1-201ENST00000451806 248 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AC025033.1-201ENST00000463883 194 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 HMGN2P9-201ENST00000476875 229 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AC107393.1-201ENST00000512403 346 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 RNU6-344P-201ENST00000516635 111 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 RNU6-250P-201ENST00000516958 103 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 RNU6-1137P-201ENST00000517073 99 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AC091144.1-201ENST00000519573 138 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 HSBP1P1-201ENST00000555205 166 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AC008749.1-201ENST00000597650 306 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AL109918.3-201ENST00000603072 338 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 AC040896.1-201ENST00000613819 479 ntBASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LYSMD4Q5XG99 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 RNU6-450P-201ENST00000364654 107 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 RNU6-1227P-201ENST00000383981 107 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 MIR586-201ENST00000385035 97 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 SNORD12B-201ENST00000410433 91 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 RNA5SP501-201ENST00000410990 112 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 ELOCP21-201ENST00000412558 336 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 AC244636.1-201ENST00000421152 228 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 AC005534.2-201ENST00000431047 433 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 AL357134.1-201ENST00000445848 426 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 RNA5SP57-201ENST00000459463 123 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 AC114982.1-201ENST00000469402 321 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 MRPS17P9-201ENST00000511924 393 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 AP003072.1-201ENST00000531740 145 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 SNORD11B-201ENST00000607707 90 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 AC083806.3-201ENST00000614016 455 ntBASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
LYSMD4Q5XG99 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AL159152.1-201ENST00000635019 2587 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 RNU1-62P-201ENST00000362599 164 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 Y_RNA.39-201ENST00000362620 98 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 RNY1P10-201ENST00000363268 113 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 RNA5SP160-201ENST00000364866 120 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 RNU1-115P-201ENST00000365329 160 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 RNU6-975P-201ENST00000384296 105 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 SNORA8-201ENST00000384574 139 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 MIR628-201ENST00000385229 95 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 333.5 ms