Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM12Q3MHD2 SNORA18.2-201ENST00000383865 132 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 Y_RNA.456-201ENST00000384232 111 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 AL606845.1-201ENST00000404881 255 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 RNU6-588P-201ENST00000410281 105 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 RNU6-710P-201ENST00000410424 105 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 CYCSP49-201ENST00000420810 319 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM12Q3MHD2 RN7SL297P-201ENST00000483161 293 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 YWHAEP4-201ENST00000505390 198 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LSM12Q3MHD2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM12Q3MHD2 MIR5006-201ENST00000583027 110 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 RPS15AP11-201ENST00000594193 385 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 HSPE1P7-201ENST00000604681 321 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 AC011603.4-201ENST00000611325 277 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 MIR3199-2-201ENST00000636243 86 ntBASIC2.8□□□□□ -1.96
LSM12Q3MHD2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.8□□□□□ -1.96
LSM12Q3MHD2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LSM12Q3MHD2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.8□□□□□ -1.96
LSM12Q3MHD2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LSM12Q3MHD2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 SNORA38.1-201ENST00000364172 131 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 RNU6-1056P-201ENST00000383996 107 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 MIR548B-201ENST00000385247 97 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 SNORD37.2-201ENST00000391075 66 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 AL139095.1-201ENST00000404326 391 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 RNU6-383P-201ENST00000410864 94 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 AL358232.1-201ENST00000448030 501 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 snoU13.14-201ENST00000459372 104 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 RPL27AP5-201ENST00000469428 449 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 RNU2-44P-201ENST00000516795 194 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 RNU2-56P-201ENST00000516826 190 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 MIR3646-201ENST00000578301 84 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 MIR6129-201ENST00000616087 109 ntBASIC2.79□□□□□ -1.96
LSM12Q3MHD2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM12Q3MHD2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 Y_RNA.294-201ENST00000364916 102 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 U8.7-201ENST00000364940 136 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 MIR1278-201ENST00000408753 81 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 TOMM22P2-201ENST00000430735 237 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 AL031183.1-201ENST00000457667 207 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 snoU13.28-201ENST00000459235 104 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 AC127455.1-201ENST00000565496 145 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 AC105137.2-201ENST00000569073 466 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 MIR5688-201ENST00000580619 83 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 AC025754.2-201ENST00000606491 432 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 AL138880.2-201ENST00000616214 239 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 MIR6844-201ENST00000637122 62 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM12Q3MHD2 AC004944.1-201ENST00000517807 3059 ntBASIC2.78□□□□□ -1.96
LSM12Q3MHD2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.97
LSM12Q3MHD2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LSM12Q3MHD2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 RNU6-1010P-201ENST00000362757 107 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 U3.9-201ENST00000363823 204 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 RNA5SP139-201ENST00000364340 117 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 RNU6-1082P-201ENST00000364574 107 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 SNORA9.2-201ENST00000365361 133 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 RNU1-109P-201ENST00000383960 147 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 SNORA1.3-201ENST00000384676 136 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 RNVU1-14-201ENST00000384770 164 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 MIR23B-201ENST00000384832 97 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 RNU6-1228P-201ENST00000391014 107 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 RNU6-1064P-201ENST00000410626 104 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 AL714022.1-201ENST00000439897 151 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM12Q3MHD2 AC145146.1-201ENST00000496370 254 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM12Q3MHD2 RAC1P5-201ENST00000512182 576 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 AP001328.1-201ENST00000528550 176 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 AC073308.1-201ENST00000623696 305 ntBASIC2.77□□□□□ -1.97
LSM12Q3MHD2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.77□□□□□ -1.97
LSM12Q3MHD2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LSM12Q3MHD2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LSM12Q3MHD2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LSM12Q3MHD2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LSM12Q3MHD2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 445.5 ms