Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CLCN2P51788 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLCN2P51788 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
CLCN2P51788 RNU6-200P-201ENST00000364743 107 ntBASIC2.55□□□□□ -2
CLCN2P51788 Y_RNA.277-201ENST00000364754 102 ntBASIC2.55□□□□□ -2
CLCN2P51788 Y_RNA.361-201ENST00000365515 120 ntBASIC2.55□□□□□ -2
CLCN2P51788 MT-TR-201ENST00000387439 65 ntBASIC2.55□□□□□ -2
CLCN2P51788 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
CLCN2P51788 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.55□□□□□ -2
CLCN2P51788 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.55□□□□□ -2
CLCN2P51788 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.55□□□□□ -2
CLCN2P51788 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.55□□□□□ -2
CLCN2P51788 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.55□□□□□ -2
CLCN2P51788 RNU6-155P-201ENST00000516347 100 ntBASIC2.55□□□□□ -2
CLCN2P51788 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
CLCN2P51788 Y_RNA.700-201ENST00000516806 100 ntBASIC2.55□□□□□ -2
CLCN2P51788 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.55□□□□□ -2
CLCN2P51788 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
CLCN2P51788 MIR4643-201ENST00000577473 78 ntBASIC2.55□□□□□ -2
CLCN2P51788 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.54□□□□□ -2
CLCN2P51788 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.54□□□□□ -2
CLCN2P51788 Y_RNA.54-201ENST00000362766 105 ntBASIC2.54□□□□□ -2
CLCN2P51788 RNU1-112P-201ENST00000364401 164 ntBASIC2.54□□□□□ -2
CLCN2P51788 RNU6-514P-201ENST00000384208 107 ntBASIC2.54□□□□□ -2
CLCN2P51788 MIR300-201ENST00000401138 83 ntBASIC2.54□□□□□ -2
CLCN2P51788 MIR1283-1-201ENST00000408494 87 ntBASIC2.54□□□□□ -2
CLCN2P51788 RNA5SP475-201ENST00000410568 110 ntBASIC2.54□□□□□ -2
CLCN2P51788 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
CLCN2P51788 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.54□□□□□ -2
CLCN2P51788 SNORA59A-201ENST00000459326 152 ntBASIC2.54□□□□□ -2
CLCN2P51788 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.54□□□□□ -2
CLCN2P51788 ATP5EP1-201ENST00000510257 156 ntBASIC2.54□□□□□ -2
CLCN2P51788 HMGB3P3-201ENST00000510526 400 ntBASIC2.54□□□□□ -2
CLCN2P51788 RNU6-138P-201ENST00000515952 107 ntBASIC2.54□□□□□ -2
CLCN2P51788 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.54□□□□□ -2
CLCN2P51788 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.54□□□□□ -2
CLCN2P51788 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
CLCN2P51788 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.54□□□□□ -2
CLCN2P51788 MIR4319-201ENST00000577285 85 ntBASIC2.54□□□□□ -2
CLCN2P51788 AC005828.6-201ENST00000606610 232 ntBASIC2.54□□□□□ -2
CLCN2P51788 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLCN2P51788 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.82-201ENST00000363000 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.92-201ENST00000363043 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 SNORD115-30-201ENST00000364117 82 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.235-201ENST00000364412 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.269-201ENST00000364685 89 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.306-201ENST00000365015 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.312-201ENST00000365089 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.322-201ENST00000365151 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.785-201ENST00000384290 109 ntBASIC2.53□□□□□ -2
CLCN2P51788 MIR548B-201ENST00000385247 97 ntBASIC2.53□□□□□ -2
CLCN2P51788 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLCN2P51788 AL139156.1-201ENST00000412785 841 ntBASIC2.53□□□□□ -2
CLCN2P51788 AC016925.1-201ENST00000458303 298 ntBASIC2.53□□□□□ -2
CLCN2P51788 SNORD109B-201ENST00000458961 67 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.650-201ENST00000459002 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 SNORD109A-201ENST00000459128 67 ntBASIC2.53□□□□□ -2
CLCN2P51788 AC090515.1-201ENST00000465295 476 ntBASIC2.53□□□□□ -2
CLCN2P51788 MIR449C-201ENST00000516047 92 ntBASIC2.53□□□□□ -2
CLCN2P51788 RNU6-107P-201ENST00000516643 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.777-201ENST00000516982 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.53□□□□□ -2
CLCN2P51788 AC009127.3-201ENST00000570531 403 ntBASIC2.53□□□□□ -2
CLCN2P51788 AC130289.1-201ENST00000577321 73 ntBASIC2.53□□□□□ -2
CLCN2P51788 MIR4282-201ENST00000583613 67 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.771-201ENST00000598668 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 AL162424.1-201ENST00000602325 221 ntBASIC2.53□□□□□ -2
CLCN2P51788 AL355297.2-201ENST00000604792 129 ntBASIC2.53□□□□□ -2
CLCN2P51788 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
CLCN2P51788 Y_RNA.789-201ENST00000622480 102 ntBASIC2.53□□□□□ -2
CLCN2P51788 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CLCN2P51788 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.53□□□□□ -2
CLCN2P51788 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.53□□□□□ -2
CLCN2P51788 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 Y_RNA.243-201ENST00000364481 109 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 RNU6-740P-201ENST00000364734 105 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 SNORD31B-201ENST00000364977 69 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.52□□□□□ -2.01
CLCN2P51788 AL161788.1-201ENST00000441805 169 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.52□□□□□ -2.01
CLCN2P51788 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCN2P51788 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.52□□□□□ -2.01
CLCN2P51788 SNORA27.4-201ENST00000516650 95 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 AC022616.8-201ENST00000533569 253 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 MIR4513-201ENST00000581077 86 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 AC006380.1-201ENST00000603598 186 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.52□□□□□ -2.01
CLCN2P51788 ZNF658B-202ENST00000615961 3375 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CLCN2P51788 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLCN2P51788 AC080100.1-201ENST00000624239 5356 ntBASIC2.52□□□□□ -2.01
CLCN2P51788 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLCN2P51788 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.51□□□□□ -2.01
CLCN2P51788 AC062016.1-201ENST00000355719 319 ntBASIC2.51□□□□□ -2.01
CLCN2P51788 RNU4-80P-201ENST00000363200 141 ntBASIC2.51□□□□□ -2.01
CLCN2P51788 Y_RNA.217-201ENST00000364214 105 ntBASIC2.51□□□□□ -2.01
CLCN2P51788 RNU6-1305P-201ENST00000364353 104 ntBASIC2.51□□□□□ -2.01
CLCN2P51788 RNU1-91P-201ENST00000364746 163 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms