Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC130289.1-201ENST00000577321 73 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 MIR3910-1-201ENST00000580936 111 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 MIR3136-201ENST00000583498 78 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 VN1R91P-201ENST00000594377 169 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 RPS29P30-201ENST00000600975 111 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AL390123.1-201ENST00000603216 237 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 MIR3976-201ENST00000606807 139 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AC004792.1-201ENST00000614523 137 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 FTX_2.1-201ENST00000618816 94 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXC13P31276 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AP000560.1-201ENST00000624150 1937 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
HOXC13P31276 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC13P31276 Y_RNA.20-201ENST00000362479 113 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 Y_RNA.29-201ENST00000362570 113 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 Y_RNA.54-201ENST00000362766 105 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 Y_RNA.180-201ENST00000363867 113 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 RNU6-280P-201ENST00000364145 104 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 RNU4-56P-201ENST00000364700 142 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 Y_RNA.297-201ENST00000364950 91 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 RNU6-142P-201ENST00000384019 107 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 Y_RNA.785-201ENST00000384290 109 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 Y_RNA.533-201ENST00000384596 114 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 MIR215-201ENST00000384858 110 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 RNU2-48P-201ENST00000410694 191 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 RNA5SP489-201ENST00000410986 109 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 RNU6-325P-201ENST00000411132 105 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC13P31276 SDAD1P3-201ENST00000427380 333 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 AL606753.1-201ENST00000427435 87 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 AC078809.1-201ENST00000427601 140 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC13P31276 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC13P31276 AL392103.1-201ENST00000447000 198 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC13P31276 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC13P31276 ACA59.1-201ENST00000515966 143 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 RNU6-965P-201ENST00000516721 96 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 AC144568.1-201ENST00000520139 137 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 HSPE1P4-201ENST00000550617 308 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 SNRPGP19-201ENST00000603826 189 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 AC009779.6-201ENST00000603972 165 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 SNORD98-201ENST00000636377 67 ntBASIC2.2□□□□□ -2.06
HOXC13P31276 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC13P31276 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HOXC13P31276 Y_RNA.84-201ENST00000363011 104 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 Y_RNA.237-201ENST00000364439 102 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 Y_RNA.526-201ENST00000384572 110 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 MIR628-201ENST00000385229 95 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 Y_RNA.595-201ENST00000410403 105 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 RNU6-130P-201ENST00000411112 103 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AP000275.1-201ENST00000411943 390 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AC019205.3-201ENST00000424573 156 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AC016700.2-201ENST00000446011 156 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC13P31276 AC004584.2-201ENST00000570407 410 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 MIR3133-201ENST00000583157 78 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AC002984.1-201ENST00000591692 448 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AC009314.1-201ENST00000603871 304 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AL034555.1-201ENST00000604816 211 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AP001282.2-201ENST00000616149 309 ntBASIC2.19□□□□□ -2.06
HOXC13P31276 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC13P31276 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC13P31276 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 Y_RNA.277-201ENST00000364754 102 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 RNU6-596P-201ENST00000365395 98 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 RNU6-746P-201ENST00000384112 109 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 RNU6-886P-201ENST00000384319 105 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 RNU6-933P-201ENST00000384424 107 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 AL603910.2-201ENST00000407268 136 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 MIR1294-201ENST00000408503 142 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 MIR548H3-201ENST00000408771 118 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 RNU6-1203P-201ENST00000410703 110 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXC13P31276 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC13P31276 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC13P31276 AC104332.1-201ENST00000440471 797 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 RPL23AP42-201ENST00000471152 471 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC13P31276 DEFB108E-201ENST00000524692 240 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 TRAV32-201ENST00000553993 340 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 AP000942.3-201ENST00000603702 160 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXC13P31276 Y_RNA.783-201ENST00000613546 102 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 AL450472.1-202ENST00000637286 180 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.18□□□□□ -2.06
HOXC13P31276 AC005336.3-201ENST00000623833 2679 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 AL391987.6-201ENST00000305671 199 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 Y_RNA.183-201ENST00000363882 113 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 RNU6-743P-201ENST00000364151 106 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 Y_RNA.269-201ENST00000364685 89 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 SNORD14D-201ENST00000384390 87 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 Y_RNA.518-201ENST00000384552 113 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 SNORA69.1-201ENST00000390904 137 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 RN7SKP61-201ENST00000410642 295 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 AL139156.1-201ENST00000412785 841 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms