Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC123900.1-201ENST00000420390 96 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 RPS29P7-201ENST00000439662 171 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 RPS4XP11-201ENST00000446897 772 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3□□□□□ -1.93
SHISA3A0PJX4 RN7SL330P-201ENST00000469709 307 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 RPL21P129-201ENST00000491732 478 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 AC093259.1-201ENST00000509755 300 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 SNORA70.14-201ENST00000516205 110 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 RNU6-856P-201ENST00000516959 98 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3□□□□□ -1.93
SHISA3A0PJX4 XIST_intron.1-201ENST00000619444 68 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 U4.6-201ENST00000621618 127 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SHISA3A0PJX4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SHISA3A0PJX4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.99□□□□□ -1.93
SHISA3A0PJX4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.99□□□□□ -1.93
SHISA3A0PJX4 RNY1P11-201ENST00000363759 113 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 SNORA62.3-201ENST00000365110 153 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.99□□□□□ -1.93
SHISA3A0PJX4 RNU11-5P-201ENST00000391216 129 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
SHISA3A0PJX4 AC025750.2-201ENST00000442609 450 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 CYCSP35-201ENST00000451978 304 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 SNORD11-201ENST00000459124 84 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 AC090515.1-201ENST00000465295 476 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 CKS1BP2-201ENST00000497342 240 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SHISA3A0PJX4 CYCSP30-201ENST00000546447 172 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 PRELID2P1-201ENST00000552837 301 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 RPL23AP91-201ENST00000569211 455 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 MIR5685-201ENST00000579080 79 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 MIR4662B-201ENST00000579498 81 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 AP003355.3-201ENST00000623465 114 ntBASIC2.99□□□□□ -1.93
SHISA3A0PJX4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHISA3A0PJX4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHISA3A0PJX4 AC103988.1-201ENST00000566382 2177 ntBASIC2.98□□□□□ -1.93
SHISA3A0PJX4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHISA3A0PJX4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.98□□□□□ -1.93
SHISA3A0PJX4 SNORA48.7-201ENST00000391302 135 ntBASIC2.98□□□□□ -1.93
SHISA3A0PJX4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.98□□□□□ -1.93
SHISA3A0PJX4 CYCSP19-201ENST00000411715 316 ntBASIC2.98□□□□□ -1.93
SHISA3A0PJX4 Y_RNA.712-201ENST00000517011 92 ntBASIC2.98□□□□□ -1.93
SHISA3A0PJX4 AC023632.4-201ENST00000517783 191 ntBASIC2.98□□□□□ -1.93
SHISA3A0PJX4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.98□□□□□ -1.93
SHISA3A0PJX4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.98□□□□□ -1.93
SHISA3A0PJX4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.98□□□□□ -1.93
SHISA3A0PJX4 AC073476.4-201ENST00000628409 72 ntBASIC2.98□□□□□ -1.93
SHISA3A0PJX4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.98□□□□□ -1.93
SHISA3A0PJX4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHISA3A0PJX4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.98□□□□□ -1.93
SHISA3A0PJX4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 Y_RNA.120-201ENST00000363304 110 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 RNU6-44P-201ENST00000384045 107 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 MIR562-201ENST00000384894 95 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 MIR520G-201ENST00000385064 90 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 MIR1253-201ENST00000408273 105 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 RNU2-70P-201ENST00000410718 179 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.97□□□□□ -1.93
SHISA3A0PJX4 RPL39P40-201ENST00000445481 146 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 RNU1-45P-201ENST00000517191 141 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 AC011604.1-201ENST00000545978 196 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 AC034105.4-201ENST00000568304 277 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 AC006130.2-201ENST00000586202 326 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.97□□□□□ -1.93
SHISA3A0PJX4 U2.20-201ENST00000613956 192 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 U6.73-201ENST00000619194 103 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHISA3A0PJX4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHISA3A0PJX4 MFSD8-233ENST00000641482 4860 ntBASIC2.97□□□□□ -1.93
SHISA3A0PJX4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.97□□□□□ -1.93
SHISA3A0PJX4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHISA3A0PJX4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SHISA3A0PJX4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHISA3A0PJX4 AL161912.2-201ENST00000565707 3007 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SHISA3A0PJX4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SHISA3A0PJX4 SNORD9-201ENST00000362566 104 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 RNA5SP119-201ENST00000362715 117 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 AL359837.1-201ENST00000381357 287 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 RNU6-136P-201ENST00000384663 107 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 RNU2-63P-201ENST00000410792 194 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 RPL23AP67-201ENST00000465341 474 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 Y_RNA.692-201ENST00000516627 105 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 AC245166.1-201ENST00000521012 253 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 AC074050.1-201ENST00000563247 211 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 MIR3117-201ENST00000584034 78 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 AC131055.1-201ENST00000584626 316 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SHISA3A0PJX4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.96□□□□□ -1.94
SHISA3A0PJX4 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.96□□□□□ -1.94
SHISA3A0PJX4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SHISA3A0PJX4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.95□□□□□ -1.94
SHISA3A0PJX4 AC093831.2-201ENST00000624393 3427 ntBASIC2.95□□□□□ -1.94
SHISA3A0PJX4 RNA5SP51-201ENST00000364750 119 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms