Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL365265.1-201ENST00000621045 234 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 AL159152.1-201ENST00000635019 2587 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-944P-201ENST00000364023 107 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 SNORD31B-201ENST00000364977 69 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 Y_RNA.368-201ENST00000365547 113 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-851P-201ENST00000384565 107 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 RNA5SP492-201ENST00000411330 114 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 AL392103.1-201ENST00000447000 198 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 CYP2C59P-201ENST00000457790 269 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 Y_RNA.662-201ENST00000516028 97 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 SNORA74D-201ENST00000516404 141 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-861P-201ENST00000516745 106 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 AC087441.2-201ENST00000529141 262 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 MIR5739-201ENST00000619803 80 ntBASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PPARGC1AQ9UBK2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 RNA5SP240-201ENST00000365355 128 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 Y_RNA.456-201ENST00000384232 111 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 MIR95-201ENST00000385072 81 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 Y_RNA.637-201ENST00000459424 114 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 RPS29P2-201ENST00000479278 136 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 AC093732.2-201ENST00000607950 274 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.05□□□□□ -1.92
PPARGC1AQ9UBK2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-461P-201ENST00000364195 107 ntBASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 Y_RNA.308-201ENST00000365043 101 ntBASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-746P-201ENST00000384112 109 ntBASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-975P-201ENST00000384296 105 ntBASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 AL445687.1-201ENST00000439946 251 ntBASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 RNU2-34P-201ENST00000516534 121 ntBASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 MIR3199-1-201ENST00000582434 88 ntBASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 snoZ196.1-201ENST00000625269 89 ntBASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
PPARGC1AQ9UBK2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-525P-201ENST00000363685 104 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-801P-201ENST00000364087 105 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 Y_RNA.287-201ENST00000364853 94 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 SNORA9.2-201ENST00000365361 133 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 MIR483-201ENST00000385070 76 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-763P-201ENST00000390865 106 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 RNA5SP344-201ENST00000411081 104 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 AC016925.1-201ENST00000458303 298 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 RNU7-57P-201ENST00000459540 60 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-221P-201ENST00000459541 99 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 MIR4308-201ENST00000580634 81 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 AL356280.1-201ENST00000603614 379 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 AL449363.1-201ENST00000617815 186 ntBASIC3.03□□□□□ -1.92
PPARGC1AQ9UBK2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.03□□□□□ -1.93
PPARGC1AQ9UBK2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-271P-201ENST00000363858 105 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 SNORA72.4-201ENST00000384174 132 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 SNORA44-201ENST00000384584 132 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 SNORA48.2-201ENST00000390926 124 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 MIR873-201ENST00000401120 77 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AL139095.1-201ENST00000404326 391 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AL355497.1-201ENST00000406262 551 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AL357139.1-201ENST00000407792 426 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 HSPE1P13-201ENST00000451143 297 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 SNORA48.11-201ENST00000517015 89 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AC005000.2-201ENST00000605468 310 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AC013791.1-201ENST00000616619 62 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.02□□□□□ -1.93
PPARGC1AQ9UBK2 AC080128.1-201ENST00000474389 1917 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 Y_RNA.121-201ENST00000363309 113 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-899P-201ENST00000363947 107 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-923P-201ENST00000364753 107 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms