Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AC007395.1-201ENST00000451333 677 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 SNORA40.14-201ENST00000516543 86 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 GNAI2P1-201ENST00000541815 315 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 HSBP1P1-201ENST00000555205 166 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 DEFB122-202ENST00000569013 197 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 MIR4680-201ENST00000580906 66 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 MIR4753-201ENST00000585119 83 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 MZT1P2-201ENST00000604387 248 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 AC068205.3-201ENST00000636385 468 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 MTND5P35-201ENST00000557537 1720 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 MTND5P6-201ENST00000422338 1798 ntBASIC2.07□□□□□ -2.08
KRTCAP3Q53RY4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 Y_RNA.162-201ENST00000363683 102 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 Y_RNA.422-201ENST00000384054 114 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-639P-201ENST00000384074 107 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-318P-201ENST00000384283 103 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 RNY3P4-201ENST00000384428 101 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 MIR586-201ENST00000385035 97 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 MIR1262-201ENST00000408276 93 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 AC113618.1-201ENST00000416747 285 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 AC112492.4-201ENST00000456549 352 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 snoU13.23-201ENST00000458863 104 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 RNA5SP57-201ENST00000459463 123 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-475P-201ENST00000516073 104 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 CYCSP23-201ENST00000519781 313 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 AL360085.1-201ENST00000604713 532 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 AC008873.1-201ENST00000625051 138 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTCAP3Q53RY4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 SNORA67.2-201ENST00000384300 149 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-738P-201ENST00000384531 106 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-1160P-201ENST00000384546 104 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 Y_RNA.527-201ENST00000384573 102 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 AC123900.1-201ENST00000420390 96 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 BX510359.4-201ENST00000423750 193 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 AC074290.1-201ENST00000448883 135 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 AC114982.1-201ENST00000469402 321 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 HMGN2P9-201ENST00000476875 229 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 AP005660.1-201ENST00000522972 293 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 AC006504.6-201ENST00000590142 199 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 AL078596.1-201ENST00000624856 447 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.05□□□□□ -2.08
KRTCAP3Q53RY4 RNU1-58P-201ENST00000362413 163 ntBASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 Y_RNA.27-201ENST00000362540 103 ntBASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 SNORD12B-201ENST00000410433 91 ntBASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 RNA5SP504-201ENST00000410676 117 ntBASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 MTND2P23-201ENST00000422990 651 ntBASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 HMGN2P3-201ENST00000433603 273 ntBASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 HMGN2P5-201ENST00000436882 273 ntBASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 UQCRBP2-201ENST00000447827 297 ntBASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-450P-201ENST00000364654 107 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 SNORD87-201ENST00000364849 89 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 SNORD14.1-201ENST00000365609 90 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 AC117470.1-201ENST00000381974 330 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 Y_RNA.526-201ENST00000384572 110 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-823P-201ENST00000391042 103 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 MIR1283-2-201ENST00000408621 87 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-985P-201ENST00000410182 104 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 RPS15AP28-201ENST00000435088 386 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 RNU6-327P-201ENST00000516270 127 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 MIR4769-201ENST00000584126 77 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 RPS29P30-201ENST00000600975 111 ntBASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTCAP3Q53RY4 U3.8-201ENST00000363675 217 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 480.5 ms