Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MTCO1P29-201ENST00000496868 288 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 HMGN1P12-201ENST00000499125 195 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 Y_RNA.688-201ENST00000516565 95 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 RNU6-344P-201ENST00000516635 111 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 MTND1P35-201ENST00000526739 508 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 AC016957.1-201ENST00000534895 309 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.66□□□□□ -2.3
ZNF140P52738 AC027288.2-201ENST00000553028 243 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.66□□□□□ -2.3
ZNF140P52738 MIR5695-201ENST00000579717 85 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.66□□□□□ -2.3
ZNF140P52738 AC146944.4-201ENST00000602697 718 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.66□□□□□ -2.3
ZNF140P52738 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 AC097520.1-201ENST00000624435 385 ntBASIC0.66□□□□□ -2.3
ZNF140P52738 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.66□□□□□ -2.3
ZNF140P52738 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
ZNF140P52738 RNU6-1123P-201ENST00000362347 106 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 Y_RNA.51-201ENST00000362725 102 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 Y_RNA.135-201ENST00000363439 95 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 Y_RNA.256-201ENST00000364594 104 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 SNORD87-201ENST00000364849 89 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 SNORD116-1-201ENST00000384335 95 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 RNU6-95P-201ENST00000384697 107 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 MIR521-1-201ENST00000384902 87 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 RNU6-1106P-201ENST00000390845 107 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 SNORD37.1-201ENST00000390968 65 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 Y_RNA.615-201ENST00000410769 117 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.65□□□□□ -2.31
ZNF140P52738 ZNF885P-201ENST00000420174 1098 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.65□□□□□ -2.31
ZNF140P52738 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.65□□□□□ -2.31
ZNF140P52738 HMGN2P26-201ENST00000463169 339 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.65□□□□□ -2.31
ZNF140P52738 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.65□□□□□ -2.31
ZNF140P52738 RNU6-58P-201ENST00000517143 103 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 SNORA70.22-201ENST00000517160 124 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 AC024995.1-201ENST00000523014 93 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
ZNF140P52738 MIR4452-201ENST00000583004 71 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 AC010525.2-201ENST00000590920 195 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 AC097065.2-201ENST00000608159 533 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 AL138726.1-201ENST00000614873 333 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.65□□□□□ -2.31
ZNF140P52738 snoZ196.1-201ENST00000625269 89 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 MTND4P12-201ENST00000498999 1377 ntBASIC0.65□□□□□ -2.31
ZNF140P52738 RNU6-451P-201ENST00000362921 107 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 SNORA72.2-201ENST00000365028 127 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 RNU6-214P-201ENST00000384130 107 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 RNU6-1031P-201ENST00000384773 107 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.64□□□□□ -2.31
ZNF140P52738 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.64□□□□□ -2.31
ZNF140P52738 AL445305.1-201ENST00000432577 575 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 ERLEC1P1-201ENST00000433806 578 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 MTCO3P18-201ENST00000440206 761 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 RPL30P10-201ENST00000488148 337 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.64□□□□□ -2.31
ZNF140P52738 RNA5SP454-201ENST00000517231 127 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 AC026407.1-201ENST00000518369 204 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.64□□□□□ -2.31
ZNF140P52738 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
ZNF140P52738 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.64□□□□□ -2.31
ZNF140P52738 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
ZNF140P52738 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 Y_RNA.41-201ENST00000362646 102 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 RNU6-1252P-201ENST00000363054 104 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 Y_RNA.100-201ENST00000363141 102 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 RNU6-1085P-201ENST00000363576 107 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 SNORD115-32-201ENST00000364079 82 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 RNU6-483P-201ENST00000384088 108 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
ZNF140P52738 AF228730.1-201ENST00000397972 663 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 MIR1185-2-201ENST00000408687 86 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 RNU6-1148P-201ENST00000410992 104 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF140P52738 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF140P52738 MTND1P29-201ENST00000448112 647 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 AC092991.1-201ENST00000477176 376 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 MTCO2P30-201ENST00000503662 364 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 Y_RNA.704-201ENST00000516851 102 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 RNU1-117P-201ENST00000517041 158 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 SUMO2P16-201ENST00000519475 264 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 MTND2P38-201ENST00000522536 667 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 AC026371.1-201ENST00000551867 419 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF140P52738 MIR3672-201ENST00000584290 82 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 SNRPGP20-201ENST00000604477 205 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 AC137590.2-201ENST00000619709 240 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 MIR8054-201ENST00000620877 86 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 AL078596.1-201ENST00000624856 447 ntBASIC0.63□□□□□ -2.31
ZNF140P52738 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.63□□□□□ -2.31
ZNF140P52738 Y_RNA.38-201ENST00000362617 102 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 RNU6-873P-201ENST00000363833 107 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 RNU6-1240P-201ENST00000365155 104 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms