Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.52□□□□□ -2.01
SNHG28P0DPA3 RNA5SP272-201ENST00000516095 111 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 RNU6-191P-201ENST00000516295 94 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 SNORA31.16-201ENST00000516773 139 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 RNA5SP291-201ENST00000517222 105 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.52□□□□□ -2.01
SNHG28P0DPA3 AL008718.3-201ENST00000610217 321 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNHG28P0DPA3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SNHG28P0DPA3 AC138915.1-201ENST00000565427 1685 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 SNORD50.2-201ENST00000365465 70 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 RNU6-541P-201ENST00000384709 110 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 RNU6-131P-201ENST00000391144 107 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 FO393413.1-201ENST00000402892 195 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 AL023284.1-201ENST00000403956 276 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 MIR1261-201ENST00000408659 82 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
SNHG28P0DPA3 Z98742.2-201ENST00000431564 187 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 AL121890.1-201ENST00000435457 205 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 GPM6BP3-201ENST00000442797 145 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 RPL30P12-201ENST00000474666 353 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.51□□□□□ -2.01
SNHG28P0DPA3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 SUMO2P18-201ENST00000518873 252 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 IGKV3-31-201ENST00000523109 329 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 MIR6873-201ENST00000622788 63 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 AC002064.3-201ENST00000623448 346 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
SNHG28P0DPA3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.51□□□□□ -2.01
SNHG28P0DPA3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNHG28P0DPA3 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 RNU6-211P-201ENST00000384047 107 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 Y_RNA.435-201ENST00000384095 112 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 MIR888-201ENST00000401186 77 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AL358075.3-201ENST00000426289 226 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AL135790.2-201ENST00000437701 267 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.5□□□□□ -2.01
SNHG28P0DPA3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 RPL30P5-201ENST00000494923 336 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AIG1P1-201ENST00000503376 148 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 SEM1P1-201ENST00000506694 209 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AC073349.3-201ENST00000617616 186 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AC024581.2-201ENST00000619986 252 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AC006001.4-201ENST00000622243 395 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AC091932.3-201ENST00000624223 323 ntBASIC2.5□□□□□ -2.01
SNHG28P0DPA3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.5□□□□□ -2.01
SNHG28P0DPA3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.5□□□□□ -2.01
SNHG28P0DPA3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNHG28P0DPA3 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC091564.4-201ENST00000533934 2194 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 RNU4-56P-201ENST00000364700 142 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 RNU6-622P-201ENST00000384272 103 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC004866.1-201ENST00000411748 78 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC024067.1-201ENST00000426199 223 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 POLR2KP2-201ENST00000438155 177 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.49□□□□□ -2.01
SNHG28P0DPA3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.49□□□□□ -2.01
SNHG28P0DPA3 Y_RNA.637-201ENST00000459424 114 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC091179.3-201ENST00000474761 144 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC233702.2-202ENST00000562547 291 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 MIR5002-201ENST00000584713 97 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC005176.2-201ENST00000596933 147 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 DEFB117-201ENST00000602356 141 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC004467.1-201ENST00000615678 330 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 MIR6132-201ENST00000622083 109 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 MIR219B-201ENST00000637023 88 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SNHG28P0DPA3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SNHG28P0DPA3 ZNF204P-201ENST00000416749 2397 ntBASIC2.49□□□□□ -2.01
SNHG28P0DPA3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.49□□□□□ -2.01
SNHG28P0DPA3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 RNU6-137P-201ENST00000363680 108 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 RNU6-1141P-201ENST00000364520 107 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 SNORA67.3-201ENST00000384366 140 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 SNORA26.3-201ENST00000391119 136 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 SNORA11.4-201ENST00000408823 129 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 RN7SKP61-201ENST00000410642 295 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 RPL23AP36-201ENST00000413895 458 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 RPL26P27-201ENST00000414397 437 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 BPY2DP-201ENST00000422208 265 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 HMGN2P10-201ENST00000448085 265 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 snoU13.15-201ENST00000459407 104 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 AC018448.1-201ENST00000552843 316 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 AL109809.4-201ENST00000603520 2185 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms