Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AL162725.1-201ENST00000435405 301 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC104332.1-201ENST00000440471 797 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.24□□□□□ -2.37
UBBP0CG47 AC079354.2-201ENST00000453523 154 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 U8.21-201ENST00000459536 136 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 RPS29P1-201ENST00000465274 159 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.24□□□□□ -2.37
UBBP0CG47 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.24□□□□□ -2.37
UBBP0CG47 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC109810.1-201ENST00000534066 224 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC009094.1-201ENST00000564443 426 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC091178.2-201ENST00000584401 117 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 uc_338.34-201ENST00000617467 174 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC103705.1-201ENST00000619013 241 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC137590.2-201ENST00000619709 240 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC079248.2-201ENST00000623779 326 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AL359757.2-201ENST00000624309 274 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.24□□□□□ -2.37
UBBP0CG47 MIR6079-201ENST00000635807 62 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 AC005592.1-201ENST00000566527 1640 ntBASIC0.24□□□□□ -2.37
UBBP0CG47 Y_RNA.167-201ENST00000363735 109 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 SNORD114-22-201ENST00000365423 72 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 Y_RNA.415-201ENST00000384012 112 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 RNU6-584P-201ENST00000410350 95 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 AL663109.1-201ENST00000411498 844 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 MTCO2P12-201ENST00000427426 682 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 HSFY5P-201ENST00000453726 309 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 SNORD65B-201ENST00000459126 73 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 AP000870.1-201ENST00000472927 406 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 AC091133.4-201ENST00000511142 308 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.23□□□□□ -2.37
UBBP0CG47 AC097462.1-201ENST00000514125 324 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 RN7SKP164-201ENST00000516138 266 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.23□□□□□ -2.37
UBBP0CG47 AL118558.2-201ENST00000556294 238 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 SUB1P2-201ENST00000556401 297 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.23□□□□□ -2.37
UBBP0CG47 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.23□□□□□ -2.37
UBBP0CG47 Z83818.1-201ENST00000603584 150 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 AL136370.1-201ENST00000608166 691 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 AL360219.1-201ENST00000610230 366 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 AC243829.6-201ENST00000612652 106 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 MIR6504-201ENST00000613520 61 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 SEPT14P17-201ENST00000617978 177 ntBASIC0.23□□□□□ -2.37
UBBP0CG47 FGF7P2-201ENST00000332473 296 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 SNORA1B-201ENST00000362535 133 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 SNORD50.1-201ENST00000362987 71 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 RNU6-1120P-201ENST00000362988 108 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 Y_RNA.336-201ENST00000365307 109 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 Y_RNA.560-201ENST00000384689 102 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
UBBP0CG47 RNU6-325P-201ENST00000411132 105 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 MTATP6P18-201ENST00000417994 673 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 MTCO1P20-201ENST00000425366 358 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 AC092423.1-201ENST00000430165 186 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 MTCO1P19-201ENST00000443487 500 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 LINC01399-202ENST00000458450 244 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 MTND1P22-201ENST00000510572 951 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 RNU6-1110P-201ENST00000516462 101 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 RNU6-759P-201ENST00000516740 103 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 SCARNA1-201ENST00000517138 166 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 AC060788.1-201ENST00000521318 469 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 MTND1P35-201ENST00000526739 508 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UBBP0CG47 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.22□□□□□ -2.37
UBBP0CG47 MIR5000-201ENST00000577717 103 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.22□□□□□ -2.37
UBBP0CG47 MIR8076-201ENST00000611401 83 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
UBBP0CG47 MIR6788-201ENST00000618842 66 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 AL158209.2-201ENST00000619266 216 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 AC006435.5-201ENST00000624486 112 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 AL008636.1-201ENST00000625038 1018 ntBASIC0.22□□□□□ -2.37
UBBP0CG47 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
UBBP0CG47 RNU6-1106P-201ENST00000390845 107 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.21□□□□□ -2.38
UBBP0CG47 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.21□□□□□ -2.38
UBBP0CG47 MTCO2P18-201ENST00000457151 658 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.21□□□□□ -2.38
UBBP0CG47 AC091179.3-201ENST00000474761 144 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 AC092436.3-201ENST00000511788 257 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.21□□□□□ -2.38
UBBP0CG47 RNU6-189P-201ENST00000516120 101 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 RNA5SP54-201ENST00000516951 92 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 RNU6-232P-201ENST00000517144 64 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 AP001372.4-201ENST00000524889 472 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 AC023157.2-201ENST00000540596 141 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.21□□□□□ -2.38
UBBP0CG47 AL157687.1-201ENST00000554853 619 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 AC023827.1-201ENST00000569247 97 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 MIR3913-1-201ENST00000577744 102 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 AC025627.3-201ENST00000582078 182 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 MIR5692C1-201ENST00000585309 91 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 FAM157A-202ENST00000615155 405 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 AC243829.3-201ENST00000622177 108 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 AC068787.1-201ENST00000623908 691 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 230.9 ms