Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.09□□□□□ -2.07
CSPG5O95196 LINC02555-201ENST00000563933 1951 ntBASIC2.09□□□□□ -2.08
CSPG5O95196 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.08□□□□□ -2.08
CSPG5O95196 Y_RNA.112-201ENST00000363250 102 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 Y_RNA.252-201ENST00000364556 101 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 RNU4-42P-201ENST00000364738 142 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 Y_RNA.364-201ENST00000365532 101 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 MIR548P-201ENST00000408336 84 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 MIR1283-2-201ENST00000408621 87 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 PMCHL1-202ENST00000423102 261 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.08□□□□□ -2.08
CSPG5O95196 USP9YP16-201ENST00000430287 407 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 AC099799.1-201ENST00000439809 192 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 AL035666.1-201ENST00000446195 348 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 USP9YP23-201ENST00000455085 407 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 Y_RNA.631-201ENST00000459607 101 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 RNU2-44P-201ENST00000516795 194 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 AC020661.2-201ENST00000560114 134 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.08□□□□□ -2.08
CSPG5O95196 AC026470.2-201ENST00000561492 181 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.08□□□□□ -2.08
CSPG5O95196 AL356055.1-201ENST00000602528 446 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 AC092447.9-201ENST00000603395 144 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 AC091925.1-201ENST00000623204 462 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 AC134503.1-201ENST00000633048 54 ntBASIC2.08□□□□□ -2.08
CSPG5O95196 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSPG5O95196 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.07□□□□□ -2.08
CSPG5O95196 Y_RNA.128-201ENST00000363391 112 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 RNU6-873P-201ENST00000363833 107 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 SNORD115-8-201ENST00000363856 82 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 RNA5SP493-201ENST00000364115 91 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 SNORD31B-201ENST00000364977 69 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 SNORD115-38-201ENST00000365037 82 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 RNY1P14-201ENST00000384426 108 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 Y_RNA.557-201ENST00000384680 107 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 MIR10B-201ENST00000385011 110 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CSPG5O95196 SNORA69.1-201ENST00000390904 137 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 RNU6-159P-201ENST00000391080 106 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 Y_RNA.605-201ENST00000410577 105 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 AC004866.1-201ENST00000411748 78 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 MTCO3P8-201ENST00000453691 755 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 AC007215.1-201ENST00000464893 276 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.07□□□□□ -2.08
CSPG5O95196 RNU7-4P-201ENST00000516961 62 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 RN7SKP295-201ENST00000517264 153 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
CSPG5O95196 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.07□□□□□ -2.08
CSPG5O95196 MIR5695-201ENST00000579717 85 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 MIR3171-201ENST00000584270 74 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 MIR4753-201ENST00000585119 83 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 snoU13.31-201ENST00000607291 104 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 AC006157.1-201ENST00000611750 366 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.07□□□□□ -2.08
CSPG5O95196 AC084768.2-201ENST00000622736 221 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CSPG5O95196 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CSPG5O95196 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
CSPG5O95196 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSPG5O95196 Y_RNA.80-201ENST00000362996 102 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 Y_RNA.332-201ENST00000365271 113 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 Y_RNA.485-201ENST00000384395 102 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 Y_RNA.592-201ENST00000410274 109 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 BTF3P4-201ENST00000418852 495 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 MTND2P29-201ENST00000438595 412 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.06□□□□□ -2.08
CSPG5O95196 MTCYBP6-201ENST00000441810 138 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 AC004386.2-201ENST00000441858 148 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.06□□□□□ -2.08
CSPG5O95196 AC022868.1-201ENST00000517767 391 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.06□□□□□ -2.08
CSPG5O95196 AC090617.3-201ENST00000573670 475 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 MIR4299-201ENST00000577899 72 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 SNRPGP20-201ENST00000604477 205 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 AC138305.3-201ENST00000624988 240 ntBASIC2.06□□□□□ -2.08
CSPG5O95196 BX322639.1-202ENST00000423987 2213 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 RNU6-545P-201ENST00000362681 104 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 RNU1-76P-201ENST00000362903 159 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 Y_RNA.148-201ENST00000363557 117 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 RNU6-1227P-201ENST00000383981 107 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 MIR1302-11-201ENST00000408051 138 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 MIR1302-9-201ENST00000408365 138 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 MIR1302-10-201ENST00000408734 138 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 RNA5SP501-201ENST00000410990 112 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CSPG5O95196 MCFD2P1-201ENST00000417812 300 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 AC114482.1-201ENST00000418010 247 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 AC005534.2-201ENST00000431047 433 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 AL160004.2-201ENST00000432935 350 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 MTND4P19-201ENST00000446659 478 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms