Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR1248-201ENST00000629190 106 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 AC091152.2-201ENST00000591628 2569 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 SNORA25.7-201ENST00000364375 127 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 RNU6-1082P-201ENST00000364574 107 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 RNU6-915P-201ENST00000364943 103 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 MIR554-201ENST00000384874 96 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 Y_RNA.584-201ENST00000391090 114 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 SNORA11-201ENST00000408789 128 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 RNU2-32P-201ENST00000411193 191 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 AL035461.1-201ENST00000421490 332 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 AC063976.3-201ENST00000426849 329 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 RNU6-1299P-201ENST00000516316 100 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 RNU6-126P-201ENST00000516685 103 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 SNORA70.18-201ENST00000516696 98 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 MIR3199-1-201ENST00000582434 88 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 AL031274.2-201ENST00000599419 203 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 MIR7515-201ENST00000637837 67 ntBASIC3.03□□□□□ -1.92
SHISA3A0PJX4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHISA3A0PJX4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
SHISA3A0PJX4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.03□□□□□ -1.93
SHISA3A0PJX4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
SHISA3A0PJX4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 Y_RNA.203-201ENST00000364106 102 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 RNU6-978P-201ENST00000364371 103 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 SNORA68.1-201ENST00000364537 132 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 MIR218-1-201ENST00000384999 110 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 FO393413.1-201ENST00000402892 195 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 AL161788.1-201ENST00000441805 169 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 MTCO1P44-201ENST00000441935 243 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 PHBP14-201ENST00000512887 367 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 RNU6-965P-201ENST00000516721 96 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 MIR5047-201ENST00000579212 100 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 MIR1254-2-201ENST00000579553 63 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 MIR4438-201ENST00000585271 93 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 AL049861.1-201ENST00000603130 150 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
SHISA3A0PJX4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.02□□□□□ -1.93
SHISA3A0PJX4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHISA3A0PJX4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHISA3A0PJX4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHISA3A0PJX4 CD24P4-201ENST00000382840 243 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 MIR30B-201ENST00000384850 88 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 AC245102.2-201ENST00000448956 180 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 AL133162.1-201ENST00000463228 453 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 AP001486.1-201ENST00000463339 476 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 RPL27AP5-201ENST00000469428 449 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 RPS29P21-201ENST00000496272 170 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.01□□□□□ -1.93
SHISA3A0PJX4 SNORA4.4-201ENST00000515921 135 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 SNORD77.4-201ENST00000516158 81 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 SNORA48.11-201ENST00000517015 89 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 RNU7-172P-201ENST00000517125 64 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 AC090049.2-201ENST00000550377 109 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 Y_RNA.757-201ENST00000578934 114 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 MIR5187-201ENST00000583479 76 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 AL929325.1-201ENST00000603096 117 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 AC097639.2-201ENST00000603159 172 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 AL356280.1-201ENST00000603614 379 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 uc_338.4-201ENST00000616635 176 ntBASIC3.01□□□□□ -1.93
SHISA3A0PJX4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SHISA3A0PJX4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHISA3A0PJX4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHISA3A0PJX4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SHISA3A0PJX4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SHISA3A0PJX4 RNA5SP383-201ENST00000362934 120 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 RNU6-1325P-201ENST00000364905 105 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 Y_RNA.332-201ENST00000365271 113 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 RNU6-1056P-201ENST00000383996 107 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 MIR134-201ENST00000385258 73 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 SNORA26-201ENST00000391286 122 ntBASIC3□□□□□ -1.93
SHISA3A0PJX4 RNU6ATAC-201ENST00000408749 126 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms