Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RNA5SP39-201ENST00000411245 120 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 RPS29P4-201ENST00000414733 161 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 AL139247.1-201ENST00000422768 325 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 RPS26P45-201ENST00000471748 340 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 MIR4644-201ENST00000579929 84 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 MIR3117-201ENST00000584034 78 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 AC091178.2-201ENST00000584401 117 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 RMST_8.1-201ENST00000610287 165 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 AC012531.5-201ENST00000611375 151 ntBASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHB9Q9Y5E1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 AC091564.4-201ENST00000533934 2194 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 RNU6-1209P-201ENST00000363655 107 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 SNORA14A-201ENST00000364773 135 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 RNU6-1138P-201ENST00000365359 106 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 SNORD116-21-201ENST00000384507 92 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 MIR548A3-201ENST00000385297 97 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 RNU6-126P-201ENST00000516685 103 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 MIR4438-201ENST00000585271 93 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 U3.45-201ENST00000607547 219 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 AL049781.1-201ENST00000623195 3585 ntBASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHB9Q9Y5E1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 Y_RNA.309-201ENST00000365046 111 ntBASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 HMGN2P18-201ENST00000450680 270 ntBASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 RPL21P10-201ENST00000463521 490 ntBASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 MRPS36P2-201ENST00000512569 299 ntBASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 RNU7-149P-201ENST00000516739 59 ntBASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 RNU7-172P-201ENST00000517125 64 ntBASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 NDUFA5P6-201ENST00000542110 379 ntBASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 MIR4662B-201ENST00000579498 81 ntBASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHB9Q9Y5E1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 RNU6-309P-201ENST00000364573 106 ntBASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 OR9P1P-201ENST00000496431 281 ntBASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 AC011604.1-201ENST00000545978 196 ntBASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 MIR3200-201ENST00000580767 85 ntBASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 AC004832.5-201ENST00000608677 401 ntBASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 Pinc.1-201ENST00000616452 154 ntBASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 MIR1248-201ENST00000629190 106 ntBASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB9Q9Y5E1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.9□□□□□ -1.78
PCDHB9Q9Y5E1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
PCDHB9Q9Y5E1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PCDHB9Q9Y5E1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PCDHB9Q9Y5E1 Y_RNA.35-201ENST00000362601 101 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 Y_RNA.52-201ENST00000362760 96 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 RNU6-508P-201ENST00000363231 103 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 RNU6-1164P-201ENST00000364428 107 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 MIR624-201ENST00000385217 97 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 MIRLET7F2-201ENST00000385277 83 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 AC093663.1-201ENST00000497190 394 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 RNU6-781P-201ENST00000516377 101 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 AL365205.2-201ENST00000594586 68 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 AC110741.2-201ENST00000605278 268 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 UCA1.1-201ENST00000620952 75 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 AC110079.1-202ENST00000635213 138 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 IPO8P1-201ENST00000455509 3109 ntBASIC3.9□□□□□ -1.79
PCDHB9Q9Y5E1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB9Q9Y5E1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB9Q9Y5E1 AC018555.1-201ENST00000567548 1980 ntBASIC3.89□□□□□ -1.79
PCDHB9Q9Y5E1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PCDHB9Q9Y5E1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms