Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKP4Q99569 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PKP4Q99569 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PKP4Q99569 MTND5P6-201ENST00000422338 1798 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 RNA5SP361-201ENST00000362686 118 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 Y_RNA.84-201ENST00000363011 104 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 RNU6-529P-201ENST00000363383 104 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 RNU6-926P-201ENST00000384075 107 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 SNORA67.4-201ENST00000384688 142 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 Y_RNA.562-201ENST00000384695 113 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 SNORD12B-201ENST00000410433 91 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 RNU6-1203P-201ENST00000410703 110 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 AC139712.2-201ENST00000424302 339 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.29□□□□□ -2.04
PKP4Q99569 snoU13.14-201ENST00000459372 104 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 RPL39P38-201ENST00000467018 153 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 HMGB1P35-201ENST00000503360 598 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 RNU7-193P-201ENST00000516723 65 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.29□□□□□ -2.04
PKP4Q99569 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.29□□□□□ -2.04
PKP4Q99569 AC005357.1-201ENST00000588399 301 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 AC011476.5-201ENST00000615594 130 ntBASIC2.29□□□□□ -2.04
PKP4Q99569 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
PKP4Q99569 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.29□□□□□ -2.04
PKP4Q99569 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PKP4Q99569 RNA5SP289-201ENST00000362332 137 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 RNU5F-3P-201ENST00000363767 117 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 MIR186-201ENST00000384988 86 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 RNU6-1093P-201ENST00000391194 107 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 RNU6-1001P-201ENST00000411265 100 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.28□□□□□ -2.04
PKP4Q99569 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.28□□□□□ -2.04
PKP4Q99569 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.28□□□□□ -2.04
PKP4Q99569 AC007215.1-201ENST00000464893 276 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 RNA5SP137-201ENST00000516833 135 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 RNU6-388P-201ENST00000517012 105 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 RNU6-389P-201ENST00000517048 105 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.28□□□□□ -2.04
PKP4Q99569 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.28□□□□□ -2.04
PKP4Q99569 MIR3126-201ENST00000577443 74 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 MIR3923-201ENST00000579521 83 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 RPL30P11-203ENST00000598995 310 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 AC005520.5-201ENST00000613926 164 ntBASIC2.28□□□□□ -2.04
PKP4Q99569 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.28□□□□□ -2.04
PKP4Q99569 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PKP4Q99569 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
PKP4Q99569 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
PKP4Q99569 MIR335-201ENST00000362173 94 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 RNU4-82P-201ENST00000362443 140 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 Y_RNA.40-201ENST00000362645 93 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 snoU2_19.2-201ENST00000363024 80 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 SNORD81.1-201ENST00000363064 77 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 Y_RNA.257-201ENST00000364596 102 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 RNU1-91P-201ENST00000364746 163 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 RNU6-1145P-201ENST00000384246 107 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 SNORD63-201ENST00000384262 68 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 Y_RNA.478-201ENST00000384358 107 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 MIR215-201ENST00000384858 110 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 MIR329-1-201ENST00000385028 80 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 Y_RNA.581-201ENST00000391017 97 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 MIR208B-201ENST00000401172 77 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 AL355497.1-201ENST00000406262 551 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 EDDM3CP-201ENST00000415977 425 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.27□□□□□ -2.05
PKP4Q99569 AIMP1P2-201ENST00000425294 312 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 AL445305.1-201ENST00000432577 575 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 RNU6-1023P-201ENST00000516137 106 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 Y_RNA.680-201ENST00000516441 93 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 MIR3128-201ENST00000581957 66 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 AL034555.1-201ENST00000604816 211 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.27□□□□□ -2.05
PKP4Q99569 AP001282.2-201ENST00000616149 309 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 SDR42E1P4-201ENST00000620894 481 ntBASIC2.27□□□□□ -2.05
PKP4Q99569 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PKP4Q99569 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PKP4Q99569 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PKP4Q99569 AL391987.6-201ENST00000305671 199 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 RNU6-873P-201ENST00000363833 107 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 Y_RNA.462-201ENST00000384268 102 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 RNU6-937P-201ENST00000384325 106 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 Y_RNA.552-201ENST00000384665 112 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 SNORA80E-201ENST00000384744 137 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PKP4Q99569 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 RNU2-20P-201ENST00000410425 191 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.26□□□□□ -2.05
PKP4Q99569 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 AC005002.2-201ENST00000438228 269 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.26□□□□□ -2.05
PKP4Q99569 RPS23P5-201ENST00000495419 428 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.26□□□□□ -2.05
PKP4Q99569 AC012433.1-201ENST00000588916 398 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 AC010999.1-201ENST00000611856 324 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms