Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 SNORA4-201ENST00000584302 138 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.51□□□□□ -2.33
LRRC39Q96DD0 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
LRRC39Q96DD0 RNU6-181P-201ENST00000363225 107 ntBASIC0.5□□□□□ -2.33
LRRC39Q96DD0 AL031577.2-201ENST00000404133 280 ntBASIC0.5□□□□□ -2.33
LRRC39Q96DD0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.5□□□□□ -2.33
LRRC39Q96DD0 AC245047.8-201ENST00000456455 284 ntBASIC0.5□□□□□ -2.33
LRRC39Q96DD0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.5□□□□□ -2.33
LRRC39Q96DD0 SNORA14.1-201ENST00000516113 141 ntBASIC0.5□□□□□ -2.33
LRRC39Q96DD0 RNU6-445P-201ENST00000516949 107 ntBASIC0.5□□□□□ -2.33
LRRC39Q96DD0 AC087854.1-201ENST00000519706 414 ntBASIC0.5□□□□□ -2.33
LRRC39Q96DD0 AC004832.4-201ENST00000608952 331 ntBASIC0.5□□□□□ -2.33
LRRC39Q96DD0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
LRRC39Q96DD0 AC006435.5-201ENST00000624486 112 ntBASIC0.5□□□□□ -2.33
LRRC39Q96DD0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
LRRC39Q96DD0 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 RNU6-1120P-201ENST00000362988 108 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 RNU6-424P-201ENST00000384367 105 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 SNORD73A-201ENST00000386062 65 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 AL049545.1-201ENST00000401856 572 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 MTND3P9-201ENST00000429526 346 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 STAG3L5P-204ENST00000443759 179 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 LINC01399-202ENST00000458450 244 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.49□□□□□ -2.33
LRRC39Q96DD0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.49□□□□□ -2.33
LRRC39Q96DD0 SNORA18.6-201ENST00000516792 115 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 RNU6-1198P-201ENST00000516904 67 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 AP002001.1-203ENST00000534002 267 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 AC016957.1-201ENST00000534895 309 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 HIF1AP1-201ENST00000553642 175 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 RMST_2.1-201ENST00000617263 136 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 AC005609.4-201ENST00000625071 447 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
LRRC39Q96DD0 SNORD115-8-201ENST00000363856 82 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 Y_RNA.269-201ENST00000364685 89 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 SNORD115-38-201ENST00000365037 82 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.48□□□□□ -2.33
LRRC39Q96DD0 MIR1185-2-201ENST00000408687 86 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.48□□□□□ -2.33
LRRC39Q96DD0 RNU7-180P-201ENST00000459240 63 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 U7.7-201ENST00000459276 60 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 RNU6-1129P-201ENST00000515964 104 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 MTND4P7-201ENST00000523876 130 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.48□□□□□ -2.33
LRRC39Q96DD0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.48□□□□□ -2.33
LRRC39Q96DD0 SUB1P2-201ENST00000556401 297 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 AL360219.1-201ENST00000610230 366 ntBASIC0.48□□□□□ -2.33
LRRC39Q96DD0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
LRRC39Q96DD0 Y_RNA.123-201ENST00000363338 102 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 RNU1-133P-201ENST00000364867 167 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 RNU6-282P-201ENST00000365357 103 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 RNU6-784P-201ENST00000384330 106 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.47□□□□□ -2.33
LRRC39Q96DD0 AL445305.1-201ENST00000432577 575 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 HSFY5P-201ENST00000453726 309 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 AF186996.7-201ENST00000492781 209 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 RNU1-117P-201ENST00000517041 158 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
LRRC39Q96DD0 AL391903.3-201ENST00000612158 163 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 AC016597.2-201ENST00000613256 341 ntBASIC0.47□□□□□ -2.33
LRRC39Q96DD0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
LRRC39Q96DD0 RNU6-82P-201ENST00000363970 107 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.46□□□□□ -2.34
LRRC39Q96DD0 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 RNA5SP504-201ENST00000410676 117 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.46□□□□□ -2.34
LRRC39Q96DD0 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.46□□□□□ -2.34
LRRC39Q96DD0 MTND1P5-201ENST00000517906 940 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.46□□□□□ -2.34
LRRC39Q96DD0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.46□□□□□ -2.34
LRRC39Q96DD0 AC004223.2-201ENST00000590309 544 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 Z83818.1-201ENST00000603584 150 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 MIR8076-201ENST00000611401 83 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 ZNF204P-201ENST00000416749 2397 ntBASIC0.46□□□□□ -2.34
LRRC39Q96DD0 AC092423.1-201ENST00000430165 186 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.45□□□□□ -2.34
LRRC39Q96DD0 snoU13.18-201ENST00000459483 104 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.45□□□□□ -2.34
LRRC39Q96DD0 RNA5SP454-201ENST00000517231 127 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AC022868.1-201ENST00000517767 391 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 MTND1P35-201ENST00000526739 508 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.45□□□□□ -2.34
LRRC39Q96DD0 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AC010620.1-201ENST00000601088 1102 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AC087683.2-201ENST00000611384 326 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AC022709.1-201ENST00000615967 87 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 uc_338.34-201ENST00000617467 174 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AC079248.2-201ENST00000623779 326 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 FER-210ENST00000628534 558 ntTSL 5 BASIC0.45□□□□□ -2.34
LRRC39Q96DD0 OR5AK4P-201ENST00000635912 903 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 AC068137.4-201ENST00000638485 296 ntBASIC0.45□□□□□ -2.34
LRRC39Q96DD0 RNU6-137P-201ENST00000363680 108 ntBASIC0.44□□□□□ -2.34
LRRC39Q96DD0 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
LRRC39Q96DD0 RNU6-1317P-201ENST00000364582 104 ntBASIC0.44□□□□□ -2.34
LRRC39Q96DD0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms