Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
MMP3P08254 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
MMP3P08254 SNORD87-201ENST00000364849 89 ntBASIC2.34□□□□□ -2.03
MMP3P08254 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.34□□□□□ -2.03
MMP3P08254 Y_RNA.415-201ENST00000384012 112 ntBASIC2.34□□□□□ -2.03
MMP3P08254 RNY3P4-201ENST00000384428 101 ntBASIC2.34□□□□□ -2.03
MMP3P08254 U8.13-201ENST00000390842 128 ntBASIC2.34□□□□□ -2.03
MMP3P08254 AL033519.2-201ENST00000403958 392 ntBASIC2.34□□□□□ -2.03
MMP3P08254 MIR1294-201ENST00000408503 142 ntBASIC2.34□□□□□ -2.03
MMP3P08254 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.34□□□□□ -2.03
MMP3P08254 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.34□□□□□ -2.03
MMP3P08254 RPEP5-201ENST00000441137 268 ntBASIC2.34□□□□□ -2.03
MMP3P08254 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.34□□□□□ -2.03
MMP3P08254 MTND5P22-201ENST00000458380 195 ntBASIC2.34□□□□□ -2.03
MMP3P08254 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.34□□□□□ -2.03
MMP3P08254 RNU5F-4P-201ENST00000516581 114 ntBASIC2.34□□□□□ -2.03
MMP3P08254 RNA5SP82-201ENST00000516707 92 ntBASIC2.34□□□□□ -2.03
MMP3P08254 Y_RNA.721-201ENST00000517207 102 ntBASIC2.34□□□□□ -2.03
MMP3P08254 AC022616.4-201ENST00000522985 181 ntBASIC2.34□□□□□ -2.03
MMP3P08254 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.34□□□□□ -2.03
MMP3P08254 SNRPGP20-201ENST00000604477 205 ntBASIC2.34□□□□□ -2.03
MMP3P08254 AC008121.3-201ENST00000618726 433 ntBASIC2.34□□□□□ -2.03
MMP3P08254 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
MMP3P08254 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
MMP3P08254 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
MMP3P08254 MTND5P35-201ENST00000557537 1720 ntBASIC2.34□□□□□ -2.04
MMP3P08254 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
MMP3P08254 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.33□□□□□ -2.04
MMP3P08254 RNU1-76P-201ENST00000362903 159 ntBASIC2.33□□□□□ -2.04
MMP3P08254 RNU6-137P-201ENST00000363680 108 ntBASIC2.33□□□□□ -2.04
MMP3P08254 Y_RNA.179-201ENST00000363844 90 ntBASIC2.33□□□□□ -2.04
MMP3P08254 RNU6-280P-201ENST00000364145 104 ntBASIC2.33□□□□□ -2.04
MMP3P08254 RNU4-50P-201ENST00000364361 141 ntBASIC2.33□□□□□ -2.04
MMP3P08254 RNU6-793P-201ENST00000384233 104 ntBASIC2.33□□□□□ -2.04
MMP3P08254 Y_RNA.512-201ENST00000384518 102 ntBASIC2.33□□□□□ -2.04
MMP3P08254 SNORD78.2-201ENST00000391076 69 ntBASIC2.33□□□□□ -2.04
MMP3P08254 RNU2-20P-201ENST00000410425 191 ntBASIC2.33□□□□□ -2.04
MMP3P08254 RNU2-63P-201ENST00000410792 194 ntBASIC2.33□□□□□ -2.04
MMP3P08254 AL139156.1-201ENST00000412785 841 ntBASIC2.33□□□□□ -2.04
MMP3P08254 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.33□□□□□ -2.04
MMP3P08254 MRPS35P2-201ENST00000508242 191 ntBASIC2.33□□□□□ -2.04
MMP3P08254 ATP5EP1-201ENST00000510257 156 ntBASIC2.33□□□□□ -2.04
MMP3P08254 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.33□□□□□ -2.04
MMP3P08254 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
MMP3P08254 MIR2355-201ENST00000517199 87 ntBASIC2.33□□□□□ -2.04
MMP3P08254 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.33□□□□□ -2.04
MMP3P08254 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.33□□□□□ -2.04
MMP3P08254 MIR4659A-201ENST00000580269 81 ntBASIC2.33□□□□□ -2.04
MMP3P08254 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.33□□□□□ -2.04
MMP3P08254 TCL6_2.1-201ENST00000615162 119 ntBASIC2.33□□□□□ -2.04
MMP3P08254 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.33□□□□□ -2.04
MMP3P08254 ZNF355P-201ENST00000427301 3216 ntBASIC2.33□□□□□ -2.04
MMP3P08254 Y_RNA.26-201ENST00000362539 101 ntBASIC2.32□□□□□ -2.04
MMP3P08254 RNU6-238P-201ENST00000363313 106 ntBASIC2.32□□□□□ -2.04
MMP3P08254 RNU6-546P-201ENST00000383991 107 ntBASIC2.32□□□□□ -2.04
MMP3P08254 Y_RNA.458-201ENST00000384240 102 ntBASIC2.32□□□□□ -2.04
MMP3P08254 RNU6-1145P-201ENST00000384246 107 ntBASIC2.32□□□□□ -2.04
MMP3P08254 MIR1252-201ENST00000408861 65 ntBASIC2.32□□□□□ -2.04
MMP3P08254 RNA5SP504-201ENST00000410676 117 ntBASIC2.32□□□□□ -2.04
MMP3P08254 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.32□□□□□ -2.04
MMP3P08254 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.32□□□□□ -2.04
MMP3P08254 AC011753.1-201ENST00000451001 220 ntBASIC2.32□□□□□ -2.04
MMP3P08254 CYP2C59P-201ENST00000457790 269 ntBASIC2.32□□□□□ -2.04
MMP3P08254 RNU7-26P-201ENST00000458980 63 ntBASIC2.32□□□□□ -2.04
MMP3P08254 AC093852.1-201ENST00000503587 266 ntBASIC2.32□□□□□ -2.04
MMP3P08254 Y_RNA.683-201ENST00000516508 93 ntBASIC2.32□□□□□ -2.04
MMP3P08254 RNU6-1012P-201ENST00000516606 109 ntBASIC2.32□□□□□ -2.04
MMP3P08254 RN7SKP49-201ENST00000516675 260 ntBASIC2.32□□□□□ -2.04
MMP3P08254 AC034114.1-201ENST00000520293 285 ntBASIC2.32□□□□□ -2.04
MMP3P08254 AC026470.2-201ENST00000561492 181 ntBASIC2.32□□□□□ -2.04
MMP3P08254 MYL12BP1-201ENST00000569826 507 ntBASIC2.32□□□□□ -2.04
MMP3P08254 AL162730.1-201ENST00000605734 292 ntBASIC2.32□□□□□ -2.04
MMP3P08254 AC240442.1-201ENST00000616055 283 ntBASIC2.32□□□□□ -2.04
MMP3P08254 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.32□□□□□ -2.04
MMP3P08254 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.32□□□□□ -2.04
MMP3P08254 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MMP3P08254 RNU6-545P-201ENST00000362681 104 ntBASIC2.31□□□□□ -2.04
MMP3P08254 RNU6-806P-201ENST00000365147 105 ntBASIC2.31□□□□□ -2.04
MMP3P08254 RNU6-245P-201ENST00000384020 107 ntBASIC2.31□□□□□ -2.04
MMP3P08254 RNU6-1105P-201ENST00000384774 107 ntBASIC2.31□□□□□ -2.04
MMP3P08254 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MMP3P08254 MIR320B2-201ENST00000408479 138 ntBASIC2.31□□□□□ -2.04
MMP3P08254 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP3P08254 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.31□□□□□ -2.04
MMP3P08254 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP3P08254 AC009237.7-201ENST00000447357 229 ntBASIC2.31□□□□□ -2.04
MMP3P08254 UQCRBP2-201ENST00000447827 297 ntBASIC2.31□□□□□ -2.04
MMP3P08254 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP3P08254 RNU7-14P-201ENST00000459331 62 ntBASIC2.31□□□□□ -2.04
MMP3P08254 SNORA40.9-201ENST00000515895 93 ntBASIC2.31□□□□□ -2.04
MMP3P08254 RNU6-635P-201ENST00000516651 102 ntBASIC2.31□□□□□ -2.04
MMP3P08254 SNORA48.11-201ENST00000517015 89 ntBASIC2.31□□□□□ -2.04
MMP3P08254 PRELID2P1-201ENST00000552837 301 ntBASIC2.31□□□□□ -2.04
MMP3P08254 AC008269.2-201ENST00000561915 1105 ntBASIC2.31□□□□□ -2.04
MMP3P08254 Y_RNA.783-201ENST00000613546 102 ntBASIC2.31□□□□□ -2.04
MMP3P08254 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MMP3P08254 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.31□□□□□ -2.04
MMP3P08254 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MMP3P08254 ZNF271P-202ENST00000465539 1970 ntBASIC2.3□□□□□ -2.04
MMP3P08254 Y_RNA.105-201ENST00000363182 111 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms