Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1aP25118 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Gm6433-201ENSMUST00000118634 875 ntBASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Gm22697-201ENSMUST00000175194 63 ntBASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Gm18101-201ENSMUST00000215769 548 ntBASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1aP25118 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms