Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RNU6-1310P-201ENST00000384153 107 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 MIR15B-201ENST00000385045 98 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 U3.40-201ENST00000408706 208 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AC027124.2-201ENST00000428249 105 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AC006028.1-201ENST00000438379 402 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 RNU6-772P-201ENST00000516042 105 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 SNORA70.19-201ENST00000516717 90 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AC136628.3-201ENST00000521868 290 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 MIR4738-201ENST00000579134 87 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AL078604.3-201ENST00000615580 211 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 snoZ196.1-201ENST00000625269 89 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 MIR3674-201ENST00000636576 68 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 MAPK10-373ENST00000641983 6772 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AC026241.1-201ENST00000517873 2142 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AC008555.8-201ENST00000623602 2168 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 Y_RNA.521-201ENST00000384560 114 ntBASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 RNA5SP475-201ENST00000410568 110 ntBASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 Y_RNA.630-201ENST00000411370 108 ntBASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 SNORD33.1-201ENST00000516213 88 ntBASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 TCL6_2.1-201ENST00000615162 119 ntBASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TMEM40Q8WWA1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 MIR450A1-201ENST00000362262 91 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 snoU2_19.1-201ENST00000362361 80 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 SNORD73B-201ENST00000364394 72 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 SNORA14A-201ENST00000364773 135 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 Y_RNA.415-201ENST00000384012 112 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 Y_RNA.495-201ENST00000384435 112 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 MIR616-201ENST00000385293 97 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 RNU4-47P-201ENST00000410876 114 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 Z98742.2-201ENST00000431564 187 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 AL353705.1-201ENST00000433468 480 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 RNU6-107P-201ENST00000516643 102 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 NDUFA5P6-201ENST00000542110 379 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 MIR3646-201ENST00000578301 84 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 AC069528.2-201ENST00000624849 1991 ntBASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
TMEM40Q8WWA1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.59□□□□□ -1.84
TMEM40Q8WWA1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 Y_RNA.35-201ENST00000362601 101 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 RNU6-454P-201ENST00000364292 107 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 SNORA18.2-201ENST00000383865 132 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 AL512604.1-201ENST00000404812 257 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 MIR1302-4-201ENST00000408701 150 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 AC126124.2-201ENST00000413542 321 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 AC004386.2-201ENST00000441858 148 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 S100A11P2-201ENST00000467589 312 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 RNA5SP341-201ENST00000516261 117 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 RNU2-12P-201ENST00000517216 168 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 MIR3121-201ENST00000579680 77 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 MIR5006-201ENST00000583027 110 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 AC006380.1-201ENST00000603598 186 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 SNORD11B-201ENST00000607707 90 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 RNVU1-4-201ENST00000612985 164 ntBASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TMEM40Q8WWA1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 Y_RNA.287-201ENST00000364853 94 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 RNA5SP229-201ENST00000410809 99 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 AC097463.2-201ENST00000421074 142 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 RN7SL863P-201ENST00000462370 296 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 AP001486.1-201ENST00000463339 476 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 AL049873.1-201ENST00000480540 376 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 RNU6-344P-201ENST00000516635 111 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 MIR2682-201ENST00000580305 110 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 AC068647.2-201ENST00000637380 353 ntBASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM40Q8WWA1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 RNU6-1082P-201ENST00000364574 107 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 RNU6-1264P-201ENST00000383891 107 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 345.3 ms