Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC093852.1-201ENST00000503587 266 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 RNU6-826P-201ENST00000516827 104 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 RNU1-117P-201ENST00000517041 158 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 CYCSP23-201ENST00000519781 313 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 MIR1273D-201ENST00000577266 86 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.812-201ENST00000610788 101 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.784-201ENST00000613803 101 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AC040896.1-201ENST00000613819 479 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AL357075.2-201ENST00000614906 189 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.787-201ENST00000616522 101 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.780-201ENST00000617336 101 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.801-201ENST00000619005 101 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 MIR6873-201ENST00000622788 63 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 MIR1262-201ENST00000408276 93 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGB4Q8WW32 HMGN2P35-201ENST00000412164 270 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 AC010469.2-201ENST00000496412 480 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 RNU6-1012P-201ENST00000516606 109 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 AC004486.1-201ENST00000546846 233 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 AK6P2-201ENST00000549020 471 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 AC104695.3-201ENST00000604052 296 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 AC025754.2-201ENST00000606491 432 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 AC022202.1-201ENST00000613515 211 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 MIR1291-201ENST00000627649 87 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 U6.92-201ENST00000636464 89 ntBASIC2.4□□□□□ -2.03
HMGB4Q8WW32 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
HMGB4Q8WW32 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
HMGB4Q8WW32 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGB4Q8WW32 RNU6-1305P-201ENST00000364353 104 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 SNORD87-201ENST00000364849 89 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 SNORD14.1-201ENST00000365609 90 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 RNU1-52P-201ENST00000384190 164 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.526-201ENST00000384572 110 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 EDDM3CP-201ENST00000415977 425 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 AC123900.1-201ENST00000420390 96 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGB4Q8WW32 PCNPP5-201ENST00000452246 481 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.638-201ENST00000459374 113 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.39□□□□□ -2.03
HMGB4Q8WW32 AC040926.1-201ENST00000530195 238 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB4Q8WW32 MIR3126-201ENST00000577443 74 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 MIR4753-201ENST00000585119 83 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 AC022432.1-201ENST00000595739 310 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB4Q8WW32 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.39□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.99-201ENST00000363138 105 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.424-201ENST00000384063 103 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 SNORD78.2-201ENST00000391076 69 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 AL590004.1-201ENST00000405321 300 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 SDAD1P3-201ENST00000427380 333 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB4Q8WW32 NDUFB4P10-201ENST00000452541 359 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGB4Q8WW32 AC026271.5-201ENST00000577873 130 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 MIR4680-201ENST00000580906 66 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 RPS29P30-201ENST00000600975 111 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 AL353621.2-201ENST00000605340 133 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 SNORD14A-201ENST00000606526 91 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 AC007742.2-201ENST00000618226 398 ntBASIC2.38□□□□□ -2.03
HMGB4Q8WW32 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB4Q8WW32 MIR340-201ENST00000362125 95 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 SNORA25.6-201ENST00000364121 118 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 RNU6-639P-201ENST00000384074 107 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 SNORA51.11-201ENST00000384442 131 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 RNU6-823P-201ENST00000391042 103 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 ELOCP21-201ENST00000412558 336 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 UQCRBP2-201ENST00000447827 297 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 FCF1P4-201ENST00000448326 183 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB4Q8WW32 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB4Q8WW32 AC074133.1-201ENST00000515696 183 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 SNORA40.9-201ENST00000515895 93 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 RNA5SP137-201ENST00000516833 135 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 RNU6-1137P-201ENST00000517073 99 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.721-201ENST00000517207 102 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 AC022616.4-201ENST00000522985 181 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB4Q8WW32 AC087441.2-201ENST00000529141 262 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 AL078596.1-201ENST00000624856 447 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 AC099654.10-201ENST00000640395 161 ntBASIC2.37□□□□□ -2.03
HMGB4Q8WW32 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HMGB4Q8WW32 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGB4Q8WW32 MTND5P6-201ENST00000422338 1798 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 U3.8-201ENST00000363675 217 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 DEFA7P-201ENST00000382676 285 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.422-201ENST00000384054 114 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 RNU6-975P-201ENST00000384296 105 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 SNORD14D-201ENST00000384390 87 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms