Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 Y_RNA.673-201ENST00000516306 88 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 AC022616.4-201ENST00000522985 181 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.32□□□□□ -2.04
HOXC13P31276 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC13P31276 AC025423.5-201ENST00000550230 219 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 PRELID2P1-201ENST00000552837 301 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 ELOCP5-201ENST00000604924 333 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 AC002044.1-201ENST00000606707 158 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 AC141273.2-201ENST00000618989 130 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 AL159153.1-201ENST00000619688 317 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 AC009831.4-201ENST00000620744 325 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC13P31276 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC13P31276 ZNF702P-202ENST00000434269 1966 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 Y_RNA.64-201ENST00000362845 102 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 Y_RNA.164-201ENST00000363709 102 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 SNORA20.1-201ENST00000364790 130 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 RNU6-806P-201ENST00000365147 105 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 Y_RNA.376-201ENST00000365638 108 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 RNU6-842P-201ENST00000384269 107 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 SNORA19-201ENST00000384737 128 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 MIR221-201ENST00000385135 110 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 AL591034.2-201ENST00000402839 359 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 MIR1252-201ENST00000408861 65 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 RNU6-293P-201ENST00000411259 106 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 AL158823.1-201ENST00000418441 478 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 CHEK2P4-201ENST00000450340 246 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 OR2AQ1P-201ENST00000451972 200 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC13P31276 AC096745.1-201ENST00000509945 370 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 RNU6-406P-201ENST00000516470 107 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 Y_RNA.715-201ENST00000517082 110 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXC13P31276 AL137100.2-201ENST00000555786 315 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 AL096840.1-201ENST00000603287 93 ntBASIC2.31□□□□□ -2.04
HOXC13P31276 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC13P31276 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC13P31276 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXC13P31276 Y_RNA.14-201ENST00000362415 103 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 Y_RNA.48-201ENST00000362710 103 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 Y_RNA.117-201ENST00000363294 101 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 RNU1-23P-201ENST00000363361 144 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 Y_RNA.151-201ENST00000363566 112 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 Y_RNA.214-201ENST00000364201 112 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 U3.13-201ENST00000364804 214 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 Y_RNA.515-201ENST00000384535 112 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 MIR29B2-201ENST00000385055 81 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 ELOCP20-201ENST00000422460 345 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 AL353997.1-201ENST00000432936 108 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 AC099799.1-201ENST00000439809 192 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 RPL23AP6-201ENST00000446637 472 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 MTND4LP30-201ENST00000454092 297 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 RNU7-187P-201ENST00000458985 68 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 AC092436.3-201ENST00000511788 257 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC13P31276 RNU6-475P-201ENST00000516073 104 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 AC115990.1-201ENST00000526957 301 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 AC040926.1-201ENST00000530195 238 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 RRN3P3-201ENST00000549207 578 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 Z98751.3-201ENST00000604447 521 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC13P31276 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 AL359851.1-201ENST00000569460 4997 ntBASIC2.3□□□□□ -2.04
HOXC13P31276 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC13P31276 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC13P31276 Y_RNA.140-201ENST00000363474 103 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 RNU6-214P-201ENST00000384130 107 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 AC243964.1-201ENST00000441814 261 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 AL359672.1-201ENST00000442302 409 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 AL031274.1-201ENST00000450334 232 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 AC025465.3-201ENST00000510570 311 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
HOXC13P31276 RNU6-138P-201ENST00000515952 107 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 RNU6-397P-201ENST00000516226 104 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 RNU6-307P-201ENST00000516743 106 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 RNU6-570P-201ENST00000517051 105 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXC13P31276 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC13P31276 AC109446.1-201ENST00000566172 220 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 MIR5188-201ENST00000583467 113 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 AC005899.2-201ENST00000584353 90 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 AC123912.5-201ENST00000605470 343 ntBASIC2.29□□□□□ -2.04
HOXC13P31276 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC13P31276 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
HOXC13P31276 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC13P31276 AC233981.2-201ENST00000611524 1614 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 snoU2_19.1-201ENST00000362361 80 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 Y_RNA.19-201ENST00000362462 99 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 RNU6-774P-201ENST00000363238 107 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 RNU6-1274P-201ENST00000384557 107 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 MIR518A2-201ENST00000384966 87 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 MIR517A-201ENST00000385001 87 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HOXC13P31276 AL590556.1-201ENST00000423231 483 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 AC139712.2-201ENST00000424302 339 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXC13P31276 MTCO3P8-201ENST00000453691 755 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 RNU7-169P-201ENST00000459456 61 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 232.4 ms