Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.59□□□□□ -1.99
SNHG28P0DPA3 MIR3144-201ENST00000579460 79 ntBASIC2.59□□□□□ -1.99
SNHG28P0DPA3 MIR5695-201ENST00000579717 85 ntBASIC2.59□□□□□ -1.99
SNHG28P0DPA3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
SNHG28P0DPA3 BX322639.1-202ENST00000423987 2213 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC068700.1-201ENST00000565862 3754 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.233-201ENST00000364407 101 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU6-217P-201ENST00000384164 104 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU6-159P-201ENST00000391080 106 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 FTH1P15-201ENST00000406984 280 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 MTATP6P29-201ENST00000415057 132 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.650-201ENST00000459002 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 COX6CP14-201ENST00000469580 174 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 MRPL42P6-201ENST00000486397 371 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 RNA5SP200-201ENST00000516360 103 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RN7SKP49-201ENST00000516675 260 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU7-110P-201ENST00000516891 62 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.777-201ENST00000516982 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 SNORA31.23-201ENST00000517219 133 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.58□□□□□ -2
SNHG28P0DPA3 AK6P2-201ENST00000549020 471 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 LINC00933-203ENST00000559812 219 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.771-201ENST00000598668 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 MZT1P2-201ENST00000604387 248 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AP002826.1-201ENST00000608835 315 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC005296.1-201ENST00000616145 209 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.789-201ENST00000622480 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 SCARNA4-202ENST00000625402 129 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.57□□□□□ -2
SNHG28P0DPA3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
SNHG28P0DPA3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SNHG28P0DPA3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SNHG28P0DPA3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNHG28P0DPA3 UBE2WP1-201ENST00000362030 340 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 SNORD56.1-201ENST00000362913 68 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-1020P-201ENST00000363684 107 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-270P-201ENST00000364131 105 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-704P-201ENST00000364162 103 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 SNORA14A-201ENST00000364773 135 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-1175P-201ENST00000365200 107 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 CD24P4-201ENST00000382840 243 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 SNORD116-20-201ENST00000384529 92 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 MIR153-2-201ENST00000385225 87 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AL033519.2-201ENST00000403958 392 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU2-61P-201ENST00000411069 191 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC074117.2-201ENST00000417130 397 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.57□□□□□ -2
SNHG28P0DPA3 AC010095.1-201ENST00000443543 144 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 Z96811.1-201ENST00000445880 108 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC091021.1-201ENST00000468051 388 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AP002001.1-203ENST00000534002 267 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 MIR4648-201ENST00000580107 72 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 Z83818.1-201ENST00000603584 150 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC072026.1-201ENST00000605023 201 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC005828.6-201ENST00000606610 232 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.57□□□□□ -2
SNHG28P0DPA3 AC027309.3-201ENST00000623419 351 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 U6.106-201ENST00000636360 105 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNHG28P0DPA3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
SNHG28P0DPA3 AC008568.2-201ENST00000623862 2313 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 U8.2-201ENST00000363156 134 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 RNU6-884P-201ENST00000363889 107 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SNORD56.5-201ENST00000364281 72 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.319-201ENST00000365138 92 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 RNY1P5-201ENST00000383890 115 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 AC138623.1-201ENST00000418060 216 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.56□□□□□ -2
SNHG28P0DPA3 UQCRBP2-201ENST00000447827 297 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SNORA40.9-201ENST00000515895 93 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SNORA27.4-201ENST00000516650 95 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms