Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.59□□□□□ -1.99
SNHG28P0DPA3 MIR3144-201ENST00000579460 79 ntBASIC2.59□□□□□ -1.99
SNHG28P0DPA3 MIR5695-201ENST00000579717 85 ntBASIC2.59□□□□□ -1.99
SNHG28P0DPA3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
SNHG28P0DPA3 BX322639.1-202ENST00000423987 2213 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC068700.1-201ENST00000565862 3754 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.233-201ENST00000364407 101 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU6-217P-201ENST00000384164 104 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU6-159P-201ENST00000391080 106 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 FTH1P15-201ENST00000406984 280 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 MTATP6P29-201ENST00000415057 132 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.650-201ENST00000459002 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 COX6CP14-201ENST00000469580 174 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 MRPL42P6-201ENST00000486397 371 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 RNA5SP200-201ENST00000516360 103 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RN7SKP49-201ENST00000516675 260 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 RNU7-110P-201ENST00000516891 62 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.777-201ENST00000516982 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 SNORA31.23-201ENST00000517219 133 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.58□□□□□ -2
SNHG28P0DPA3 AK6P2-201ENST00000549020 471 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 LINC00933-203ENST00000559812 219 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.771-201ENST00000598668 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 MZT1P2-201ENST00000604387 248 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AP002826.1-201ENST00000608835 315 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC005296.1-201ENST00000616145 209 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 Y_RNA.789-201ENST00000622480 102 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 SCARNA4-202ENST00000625402 129 ntBASIC2.58□□□□□ -2
SNHG28P0DPA3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.58□□□□□ -2
SNHG28P0DPA3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.57□□□□□ -2
SNHG28P0DPA3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
SNHG28P0DPA3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SNHG28P0DPA3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SNHG28P0DPA3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNHG28P0DPA3 UBE2WP1-201ENST00000362030 340 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 SNORD56.1-201ENST00000362913 68 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-1020P-201ENST00000363684 107 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-270P-201ENST00000364131 105 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-704P-201ENST00000364162 103 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 SNORA14A-201ENST00000364773 135 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-1175P-201ENST00000365200 107 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 CD24P4-201ENST00000382840 243 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 SNORD116-20-201ENST00000384529 92 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 MIR153-2-201ENST00000385225 87 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AL033519.2-201ENST00000403958 392 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU2-61P-201ENST00000411069 191 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC074117.2-201ENST00000417130 397 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.57□□□□□ -2
SNHG28P0DPA3 AC010095.1-201ENST00000443543 144 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 Z96811.1-201ENST00000445880 108 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC091021.1-201ENST00000468051 388 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AP002001.1-203ENST00000534002 267 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 MIR4648-201ENST00000580107 72 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 Z83818.1-201ENST00000603584 150 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC072026.1-201ENST00000605023 201 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC005828.6-201ENST00000606610 232 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.57□□□□□ -2
SNHG28P0DPA3 AC027309.3-201ENST00000623419 351 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 U6.106-201ENST00000636360 105 ntBASIC2.57□□□□□ -2
SNHG28P0DPA3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNHG28P0DPA3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
SNHG28P0DPA3 AC008568.2-201ENST00000623862 2313 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 U8.2-201ENST00000363156 134 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 RNU6-884P-201ENST00000363889 107 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SNORD56.5-201ENST00000364281 72 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.319-201ENST00000365138 92 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 RNY1P5-201ENST00000383890 115 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 AC138623.1-201ENST00000418060 216 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.56□□□□□ -2
SNHG28P0DPA3 UQCRBP2-201ENST00000447827 297 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.56□□□□□ -2
SNHG28P0DPA3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SNORA40.9-201ENST00000515895 93 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SNORA27.4-201ENST00000516650 95 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms