Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNA5SP240-201ENST00000365355 128 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 SNORD116-18-201ENST00000383961 92 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 MIR554-201ENST00000384874 96 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 MIR218-2-201ENST00000385006 110 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 RNU7-57P-201ENST00000459540 60 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 AC083906.5-201ENST00000503722 328 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.11□□□□□ -1.91
NPHS1O60500 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.11□□□□□ -1.91
NPHS1O60500 MIR2682-201ENST00000580305 110 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 AC025754.2-201ENST00000606491 432 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 uc_338.25-201ENST00000613756 156 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 AC039056.2-201ENST00000622261 511 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.11□□□□□ -1.91
NPHS1O60500 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.11□□□□□ -1.91
NPHS1O60500 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPHS1O60500 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
NPHS1O60500 AP003122.5-201ENST00000527668 3766 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 Y_RNA.124-201ENST00000363339 93 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 RNU6-704P-201ENST00000364162 103 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 RNU6-312P-201ENST00000364629 107 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 RNU6-234P-201ENST00000365229 104 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 Y_RNA.456-201ENST00000384232 111 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 SNORD14D-201ENST00000384390 87 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 Y_RNA.572-201ENST00000384757 98 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 SNORA48.5-201ENST00000391143 135 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 RPL30P4-201ENST00000429309 333 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHS1O60500 SEPT7P4-201ENST00000437076 306 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 ATP5EP1-201ENST00000510257 156 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 RN7SKP43-201ENST00000516173 320 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 AC004832.4-201ENST00000608952 331 ntBASIC3.1□□□□□ -1.91
NPHS1O60500 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPHS1O60500 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
NPHS1O60500 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPHS1O60500 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NPHS1O60500 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
NPHS1O60500 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHS1O60500 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NPHS1O60500 Y_RNA.23-201ENST00000362496 106 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 RNU6-899P-201ENST00000363947 107 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 snoU2_19.4-201ENST00000364329 80 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 MIR218-1-201ENST00000384999 110 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 Y_RNA.580-201ENST00000391004 95 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 MIR300-201ENST00000401138 83 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 AL355796.1-201ENST00000406706 323 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 RNU7-141P-201ENST00000459304 62 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 AC090515.1-201ENST00000465295 476 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 RN7SL542P-201ENST00000467147 294 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 RPS29P2-201ENST00000479278 136 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.09□□□□□ -1.91
NPHS1O60500 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.09□□□□□ -1.91
NPHS1O60500 SNORA70.12-201ENST00000516084 153 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 RNU1-45P-201ENST00000517191 141 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 RNU6-586P-201ENST00000517265 104 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 AC026403.1-201ENST00000518938 295 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 AC109329.2-201ENST00000519658 482 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 AC069294.1-201ENST00000608397 350 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 AC034229.5-201ENST00000624258 185 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 AC012442.3-202ENST00000636742 206 ntBASIC3.09□□□□□ -1.91
NPHS1O60500 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NPHS1O60500 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.09□□□□□ -1.92
NPHS1O60500 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
NPHS1O60500 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.09□□□□□ -1.92
NPHS1O60500 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPHS1O60500 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NPHS1O60500 AL049781.1-201ENST00000623195 3585 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 SNORD50.2-201ENST00000365465 70 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 SNORA8.3-201ENST00000384679 139 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 MIR626-201ENST00000385032 94 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 AL355497.1-201ENST00000406262 551 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 AL353705.1-201ENST00000433468 480 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.08□□□□□ -1.92
NPHS1O60500 AC092185.1-201ENST00000491371 97 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 Y_RNA.797-201ENST00000515977 94 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.08□□□□□ -1.92
NPHS1O60500 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHS1O60500 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.08□□□□□ -1.92
NPHS1O60500 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.08□□□□□ -1.92
NPHS1O60500 MIR4753-201ENST00000585119 83 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 MIR7515-201ENST00000637837 67 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NPHS1O60500 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHS1O60500 AL355596.1-201ENST00000565399 3996 ntBASIC3.08□□□□□ -1.92
NPHS1O60500 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NPHS1O60500 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPHS1O60500 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.07□□□□□ -1.92
NPHS1O60500 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NPHS1O60500 Y_RNA.24-201ENST00000362508 103 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 RNU4-84P-201ENST00000364200 139 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 RNU6-275P-201ENST00000364910 107 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 SNORD113-1-201ENST00000365321 69 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPHS1O60500 SNORA20B-201ENST00000384220 132 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms