Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNU7-120P-201ENST00000459334 63 ntBASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 Y_RNA.638-201ENST00000459374 113 ntBASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 DEFB131C-201ENST00000528817 165 ntBASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 RPL30P11-203ENST00000598995 310 ntBASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 AC073349.3-201ENST00000617616 186 ntBASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 MIR8057-201ENST00000620957 69 ntBASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PPARGC1AQ9UBK2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.21□□□□□ -1.89
PPARGC1AQ9UBK2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AL355596.1-201ENST00000565399 3996 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 U3.8-201ENST00000363675 217 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 Y_RNA.217-201ENST00000364214 105 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 Y_RNA.270-201ENST00000364693 104 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 RNU6-1180P-201ENST00000364935 107 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 SNORA18.2-201ENST00000383865 132 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 SNORA67.2-201ENST00000384300 149 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 RNU6-1289P-201ENST00000384431 106 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AC004866.1-201ENST00000411748 78 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AC104332.1-201ENST00000440471 797 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 RPS12P18-201ENST00000442381 270 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 Y_RNA.641-201ENST00000459414 105 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 MRPS36P2-201ENST00000512569 299 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 Y_RNA.679-201ENST00000516416 91 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AP005660.1-201ENST00000522972 293 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AP002001.1-203ENST00000534002 267 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 UBL5P2-201ENST00000583788 219 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 AC135776.4-201ENST00000624300 1904 ntBASIC3.21□□□□□ -1.9
PPARGC1AQ9UBK2 SNORA46-201ENST00000384762 135 ntBASIC3.2□□□□□ -1.9
PPARGC1AQ9UBK2 RNA5SP504-201ENST00000410676 117 ntBASIC3.2□□□□□ -1.9
PPARGC1AQ9UBK2 AC024067.1-201ENST00000426199 223 ntBASIC3.2□□□□□ -1.9
PPARGC1AQ9UBK2 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
PPARGC1AQ9UBK2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.2□□□□□ -1.9
PPARGC1AQ9UBK2 AC011921.3-201ENST00000605540 361 ntBASIC3.2□□□□□ -1.9
PPARGC1AQ9UBK2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.2□□□□□ -1.9
PPARGC1AQ9UBK2 AC010329.5-201ENST00000623497 2174 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 RNA5SP374-201ENST00000362939 125 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 SUMO1P3-201ENST00000439961 304 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 RNU6-191P-201ENST00000516295 94 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 RN7SKP57-201ENST00000517248 293 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 HSPE1P18-201ENST00000517602 280 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 RPL21P9-201ENST00000556149 474 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 MIR3684-201ENST00000579779 74 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 AL365434.2-201ENST00000607979 234 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 MIR7157-201ENST00000635801 60 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 AL035425.3-201ENST00000564206 4996 ntBASIC3.19□□□□□ -1.9
PPARGC1AQ9UBK2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 RNA5SP387-201ENST00000364226 106 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 RNU6-886P-201ENST00000384319 105 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 MIR586-201ENST00000385035 97 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 FO393413.1-201ENST00000402892 195 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 SUMO1P2-201ENST00000452524 304 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 SNORD116-28-201ENST00000516123 91 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 RNU6-966P-201ENST00000516479 104 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 RNU6-107P-201ENST00000516643 102 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 AP002392.1-201ENST00000537692 208 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.18□□□□□ -1.9
PPARGC1AQ9UBK2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 RNU4-80P-201ENST00000363200 141 ntBASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 MIR627-201ENST00000384979 97 ntBASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 SRIP1-201ENST00000489235 288 ntBASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 AC024405.2-202ENST00000532731 184 ntBASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 AC072026.1-201ENST00000605023 201 ntBASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PPARGC1AQ9UBK2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 RNU6-1020P-201ENST00000363684 107 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 RNU6-454P-201ENST00000364292 107 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 SNORD87-201ENST00000364849 89 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 SNORA9-201ENST00000384215 133 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 SNORA54-201ENST00000384281 123 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 Y_RNA.464-201ENST00000384282 110 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms