Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 Y_RNA.145-201ENST00000363527 102 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 SNORA63C-201ENST00000364578 129 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-450P-201ENST00000364654 107 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNA5SP125-201ENST00000364843 120 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-546P-201ENST00000383991 107 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-793P-201ENST00000384233 104 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-738P-201ENST00000384531 106 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNA5SP213-201ENST00000391031 106 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-823P-201ENST00000391042 103 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-985P-201ENST00000410182 104 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 MTND2P23-201ENST00000422990 651 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU6-764P-201ENST00000516396 105 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNA5SP281-201ENST00000516504 135 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 AC107871.2-201ENST00000612894 502 ntBASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM43Q96BQ3 MTND5P6-201ENST00000422338 1798 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 RNU1-62P-201ENST00000362599 164 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 RNA5SP361-201ENST00000362686 118 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 RNU1-76P-201ENST00000362903 159 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 SNORD78.2-201ENST00000391076 69 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 RNU2-32P-201ENST00000411193 191 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 AL451074.5-201ENST00000415894 435 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 AC113618.1-201ENST00000416747 285 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 HMGN2P23-201ENST00000456759 269 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 MIR449C-201ENST00000516047 92 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 RNU6-1045P-201ENST00000516321 107 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 RNU2-44P-201ENST00000516795 194 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 RNU6-1137P-201ENST00000517073 99 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 Y_RNA.720-201ENST00000517166 92 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
TRIM43Q96BQ3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
TRIM43Q96BQ3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.380-201ENST00000365663 111 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 RNU6-708P-201ENST00000384217 107 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 MIR561-201ENST00000385216 97 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 SDAD1P3-201ENST00000427380 333 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 AC009237.7-201ENST00000447357 229 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 RPS23P5-201ENST00000495419 428 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 RN7SKP49-201ENST00000516675 260 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 RNU6-965P-201ENST00000516721 96 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 DEFB131C-201ENST00000528817 165 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 AC022616.8-201ENST00000533569 253 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 AC008737.2-201ENST00000599446 118 ntBASIC2.71□□□□□ -1.98
TRIM43Q96BQ3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 RNU1-23P-201ENST00000363361 144 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 RNU6-234P-201ENST00000365229 104 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 SNORA63.7-201ENST00000365579 123 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 RNU6-318P-201ENST00000384283 103 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 SUMO1P4-201ENST00000429430 302 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 RPS12P2-201ENST00000439728 269 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 RNA5SP458-201ENST00000516188 119 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.715-201ENST00000517082 110 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 CYCSP23-201ENST00000519781 313 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 AC021269.2-201ENST00000532318 330 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 AC023824.2-201ENST00000566185 400 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 AC113195.1-201ENST00000579952 141 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 U6.92-201ENST00000636464 89 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 MTND5P35-201ENST00000557537 1720 ntBASIC2.7□□□□□ -1.98
TRIM43Q96BQ3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.152-201ENST00000363578 100 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.459-201ENST00000384251 102 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.471-201ENST00000384312 102 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 RNU6-1026P-201ENST00000384465 108 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.551-201ENST00000384661 102 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 MIR329-1-201ENST00000385028 80 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 MIR1252-201ENST00000408861 65 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 SNORD12B-201ENST00000410433 91 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 AC091179.3-201ENST00000474761 144 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 AP004217.1-201ENST00000480579 346 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 RNU6-344P-201ENST00000516635 111 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 AC034114.1-201ENST00000520293 285 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms