Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.66□□□□□ -1.82
TMEM40Q8WWA1 RNU6-727P-201ENST00000363592 107 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 RNU6-1048P-201ENST00000364054 107 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 RNU1-57P-201ENST00000384491 166 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 RNU1-89P-201ENST00000384592 164 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 RNU6-768P-201ENST00000384683 107 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 AC063976.4-201ENST00000421971 163 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 AL365496.1-201ENST00000426885 215 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 AL357552.1-201ENST00000445254 415 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 AL121914.1-201ENST00000450188 156 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 RPL36AP48-201ENST00000485521 314 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 RNU6-561P-201ENST00000516222 102 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 uc_338.14-201ENST00000613162 166 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 PCGEM1.1-201ENST00000613431 131 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 AC013791.1-201ENST00000616619 62 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 MIR6844-201ENST00000637122 62 ntBASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM40Q8WWA1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 RNU1-70P-201ENST00000362618 164 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 MT-TT-201ENST00000387460 66 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 SNORA40.5-201ENST00000391061 128 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 RNA5SP201-201ENST00000410316 124 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 HMGN2P20-201ENST00000437531 273 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 MTCO1P44-201ENST00000441935 243 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 RPL23AP70-201ENST00000483361 460 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 RNU6-436P-201ENST00000516171 114 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 RNU6-711P-201ENST00000517255 106 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 EIF4A1P12-201ENST00000551910 141 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 MIR4474-201ENST00000579189 78 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 AL513302.2-201ENST00000562313 1842 ntBASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TMEM40Q8WWA1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 RNU4-15P-201ENST00000362613 141 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 U3.9-201ENST00000363823 204 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 RNU6-324P-201ENST00000363957 106 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 SNORA25.7-201ENST00000364375 127 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 RNU6-915P-201ENST00000364943 103 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 SNORA8.3-201ENST00000384679 139 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 AC146507.2-201ENST00000460608 476 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 AC145146.1-201ENST00000496370 254 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 SCARNA13-201ENST00000516672 275 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 Y_RNA.694-201ENST00000516677 117 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 MIR4325-201ENST00000583049 90 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 MIR3914-2-201ENST00000637339 95 ntBASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM40Q8WWA1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 RNA5SP322-201ENST00000363617 119 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 Y_RNA.251-201ENST00000364551 99 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 RNU6-969P-201ENST00000383900 105 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 MIR591-201ENST00000385290 95 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 RNA5SP354-201ENST00000391247 136 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 RNY4P30-201ENST00000410216 95 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 RPS3P1-201ENST00000456781 192 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 RPS4XP2-201ENST00000458402 793 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AC006445.1-201ENST00000491925 405 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AC079598.5-201ENST00000547460 117 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AC005562.2-201ENST00000618264 111 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 AC018692.3-201ENST00000623929 123 ntBASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM40Q8WWA1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 AC010329.5-201ENST00000623497 2174 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 Y_RNA.369-201ENST00000365568 117 ntBASIC3.61□□□□□ -1.83
TMEM40Q8WWA1 RNU6-643P-201ENST00000384018 107 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms