Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNA5SP21-201ENST00000410917 96 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 RNU6-651P-201ENST00000411040 105 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 RNU5A-5P-201ENST00000411054 116 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 RPL19P1-201ENST00000411635 428 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT40Q6A162 AC007395.1-201ENST00000451333 677 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 AP001324.2-201ENST00000461163 319 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 RNU7-110P-201ENST00000516891 62 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 RNU6-711P-201ENST00000517255 106 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 SNORA81.3-201ENST00000517283 198 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.11□□□□□ -1.91
KRT40Q6A162 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT40Q6A162 AL034555.1-201ENST00000604816 211 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 AL365434.2-201ENST00000607979 234 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.11□□□□□ -1.91
KRT40Q6A162 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRT40Q6A162 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.11□□□□□ -1.91
KRT40Q6A162 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT40Q6A162 MTND5P35-201ENST00000557537 1720 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 AC103988.1-201ENST00000566382 2177 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
KRT40Q6A162 Y_RNA.297-201ENST00000364950 91 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 RNU6-326P-201ENST00000365480 107 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 Y_RNA.418-201ENST00000384029 102 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 MIR208B-201ENST00000401172 77 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 AL603908.1-201ENST00000406098 201 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 RNU6-1077P-201ENST00000410506 102 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 AC004866.1-201ENST00000411748 78 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 ELOCP21-201ENST00000412558 336 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 AC096649.2-201ENST00000416186 393 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.1□□□□□ -1.91
KRT40Q6A162 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.1□□□□□ -1.91
KRT40Q6A162 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT40Q6A162 AL031183.1-201ENST00000457667 207 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 SNORA31.1-201ENST00000515993 133 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 SNORA31.5-201ENST00000516190 133 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 SNORA31.21-201ENST00000517180 77 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 AP002001.1-203ENST00000534002 267 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 AC233702.2-202ENST00000562547 291 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 SNORD53-201ENST00000579969 78 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT40Q6A162 AC023043.3-201ENST00000593113 385 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 AC064859.1-201ENST00000624741 174 ntBASIC3.1□□□□□ -1.91
KRT40Q6A162 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
KRT40Q6A162 RNU4-15P-201ENST00000362613 141 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 Y_RNA.44-201ENST00000362676 108 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 Y_RNA.200-201ENST00000364018 102 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 Y_RNA.230-201ENST00000364348 109 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 PIGPP3-201ENST00000425307 415 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 SUMO1P2-201ENST00000452524 304 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.09□□□□□ -1.91
KRT40Q6A162 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.09□□□□□ -1.91
KRT40Q6A162 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 RNA5SP24-201ENST00000516478 95 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 Y_RNA.683-201ENST00000516508 93 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 Y_RNA.700-201ENST00000516806 100 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 RNU2-31P-201ENST00000516954 155 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
KRT40Q6A162 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
KRT40Q6A162 DEFB131C-201ENST00000528817 165 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 AC105137.2-201ENST00000569073 466 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 FTX_2.1-201ENST00000618816 94 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
KRT40Q6A162 AL109809.4-201ENST00000603520 2185 ntBASIC3.09□□□□□ -1.91
KRT40Q6A162 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.92
KRT40Q6A162 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRT40Q6A162 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.08□□□□□ -1.92
KRT40Q6A162 Y_RNA.101-201ENST00000363154 102 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 U8.2-201ENST00000363156 134 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 RNU6-740P-201ENST00000364734 105 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 RNU6-21P-201ENST00000384710 107 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 Y_RNA.569-201ENST00000384749 103 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 MIR1298-201ENST00000408783 112 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 Y_RNA.595-201ENST00000410403 105 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT40Q6A162 MRPS10P1-201ENST00000448483 130 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 PRELID3BP1-201ENST00000457142 540 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 SNORD59.2-201ENST00000516873 68 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.08□□□□□ -1.92
KRT40Q6A162 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT40Q6A162 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT40Q6A162 AC025281.1-201ENST00000567026 265 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT40Q6A162 MIR4635-201ENST00000583759 79 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT40Q6A162 AC008749.1-201ENST00000597650 306 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 AC011921.3-201ENST00000605540 361 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 PCGEM1.1-201ENST00000613431 131 ntBASIC3.08□□□□□ -1.92
KRT40Q6A162 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.08□□□□□ -1.92
KRT40Q6A162 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.08□□□□□ -1.92
KRT40Q6A162 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRT40Q6A162 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
KRT40Q6A162 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
KRT40Q6A162 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 Y_RNA.179-201ENST00000363844 90 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 RNU6-245P-201ENST00000384020 107 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 RNU6-793P-201ENST00000384233 104 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 MIR186-201ENST00000384988 86 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms