Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 snoU13.14-201ENST00000459372 104 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 snoU13.15-201ENST00000459407 104 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 AC104435.1-201ENST00000483483 166 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 RPL30P10-201ENST00000488148 337 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 AC015911.1-201ENST00000495111 156 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 RNU6-237P-201ENST00000515985 71 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 RNU7-193P-201ENST00000516723 65 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 MIR3126-201ENST00000577443 74 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 MIR4648-201ENST00000580107 72 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 MIR5694-201ENST00000581190 76 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 AC241585.2-209ENST00000638217 143 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 AP000553.5-201ENST00000641933 54 ntBASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX43Q9NXZ2 Y_RNA.39-201ENST00000362620 98 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 RNU6-212P-201ENST00000362642 104 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 RNU6-1210P-201ENST00000363775 107 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 Y_RNA.314-201ENST00000365114 102 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 SNORA25B-201ENST00000365507 128 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 MIR504-201ENST00000385065 83 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 RNA5SP494-201ENST00000410653 129 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC096644.2-201ENST00000429278 159 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AL591043.1-201ENST00000432461 424 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC114801.2-201ENST00000503825 781 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 RNA5SP200-201ENST00000516360 103 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 SNORA40.14-201ENST00000516543 86 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC008269.2-201ENST00000561915 1105 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC004584.2-201ENST00000570407 410 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 MIR3671-201ENST00000580455 88 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AL670379.2-201ENST00000604983 252 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 MIR1244-1-201ENST00000612829 85 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC097372.5-201ENST00000623665 376 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 AC012640.5-201ENST00000623897 319 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 MIR1244-3-201ENST00000635744 85 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 MIR1244-2-201ENST00000636449 85 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 MIR1244-4-202ENST00000636813 85 ntBASIC2.34□□□□□ -2.03
DDX43Q9NXZ2 ZNF72P-201ENST00000425869 1908 ntBASIC2.34□□□□□ -2.04
DDX43Q9NXZ2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.40-201ENST00000362645 93 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.47-201ENST00000362697 108 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 RNU1-23P-201ENST00000363361 144 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.193-201ENST00000363979 102 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 SNORD32A-201ENST00000364805 84 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 RNU6-196P-201ENST00000384315 107 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 AC114482.1-201ENST00000418010 247 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 MTCYBP10-201ENST00000424905 650 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 AC091874.1-201ENST00000511402 339 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.721-201ENST00000517207 102 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 AC022616.4-201ENST00000522985 181 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 PRR13P7-201ENST00000605538 430 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 AL021879.1-201ENST00000611756 288 ntBASIC2.33□□□□□ -2.04
DDX43Q9NXZ2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.123-201ENST00000363338 102 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 RNU6-527P-201ENST00000363425 104 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.389-201ENST00000383924 113 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.452-201ENST00000384202 108 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 CBX3P9-201ENST00000402326 552 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 RNU6-101P-201ENST00000410323 104 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 EDDM3CP-201ENST00000415977 425 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 RPL23AP95-201ENST00000426806 265 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 MTCO3P29-201ENST00000432119 779 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 RPL30P12-201ENST00000474666 353 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 AC093852.1-201ENST00000503587 266 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 Z98751.3-201ENST00000604447 521 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 AC010205.1-201ENST00000616668 449 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 MIR7843-201ENST00000622274 79 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 AC090517.3-201ENST00000625170 141 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 SNORA43.4-201ENST00000629559 138 ntBASIC2.32□□□□□ -2.04
DDX43Q9NXZ2 AP000560.1-201ENST00000624150 1937 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.574-201ENST00000384766 95 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 SNORA12.2-201ENST00000391040 156 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 RNU6-1109P-201ENST00000391187 107 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 RPL21P1-201ENST00000399532 476 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms