Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 SNORD32B-201ENST00000364460 84 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 SNORD113-1-201ENST00000365321 69 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 SNORD50.2-201ENST00000365465 70 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 MIR490-201ENST00000384865 128 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 MIR548B-201ENST00000385247 97 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 SNORD17-201ENST00000390930 237 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 SNORA26.5-201ENST00000391215 123 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 AL357075.1-201ENST00000404107 726 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 RNU6-710P-201ENST00000410424 105 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 RPL21P10-201ENST00000463521 490 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 AC100767.1-201ENST00000528178 123 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 MIR4765-201ENST00000585007 77 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 AC099778.2-201ENST00000610904 211 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 U6.115-201ENST00000636045 103 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 AC010329.5-201ENST00000623497 2174 ntBASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PTCHD1Q96NR3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 MFSD8-233ENST00000641482 4860 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.121-201ENST00000363309 113 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.272-201ENST00000364696 102 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 MIR183-201ENST00000384958 110 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 AC009414.1-201ENST00000427200 443 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 AL357552.1-201ENST00000445254 415 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 AC146507.2-201ENST00000460608 476 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 SRIP1-201ENST00000489235 288 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 AC103810.1-201ENST00000579873 453 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 U6.105-201ENST00000637379 88 ntBASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTCHD1Q96NR3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 GABRG2-229ENST00000641017 3628 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.75-201ENST00000362927 97 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.182-201ENST00000363880 111 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 RNU6-312P-201ENST00000364629 107 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.287-201ENST00000364853 94 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.412-201ENST00000384001 104 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 MIR586-201ENST00000385035 97 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 MIR29B2-201ENST00000385055 81 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.580-201ENST00000391004 95 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 RPS20P10-201ENST00000451209 253 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 RPS27AP9-201ENST00000477681 438 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 RNA5SP112-201ENST00000515937 99 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 SNORA70.19-201ENST00000516717 90 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 AP001485.1-201ENST00000604799 199 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 AC013791.1-201ENST00000616619 62 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 AC090517.3-201ENST00000625170 141 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 MTND1P7-201ENST00000632801 297 ntBASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD1Q96NR3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 AC134026.1-201ENST00000623249 2239 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.23-201ENST00000362496 106 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 RNA5SP139-201ENST00000364340 117 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 RNU6-1130P-201ENST00000365434 107 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 SNORD116-18-201ENST00000383961 92 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 SNORA72.4-201ENST00000384174 132 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 MIR184-201ENST00000384962 84 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 RNU6-855P-201ENST00000410395 104 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 AL139281.1-201ENST00000422120 335 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 FCF1P8-201ENST00000510322 597 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 IGKV2-26-201ENST00000518305 343 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 MIR7975-201ENST00000619350 68 ntBASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTCHD1Q96NR3 MAPK10-322ENST00000641485 4530 ntBASIC3.21□□□□□ -1.89
PTCHD1Q96NR3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCHD1Q96NR3 SNORA63.1-201ENST00000362493 131 ntBASIC3.21□□□□□ -1.9
PTCHD1Q96NR3 RNU6-1048P-201ENST00000364054 107 ntBASIC3.21□□□□□ -1.9
PTCHD1Q96NR3 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
PTCHD1Q96NR3 Y_RNA.361-201ENST00000365515 120 ntBASIC3.21□□□□□ -1.9
PTCHD1Q96NR3 Y_RNA.368-201ENST00000365547 113 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms