Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 RN7SL601P-201ENST00000471221 293 ntBASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 SRIP1-201ENST00000489235 288 ntBASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 RNU6-1333P-201ENST00000516162 93 ntBASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 RN7SKP57-201ENST00000517248 293 ntBASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 MIR7851-201ENST00000610611 160 ntBASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 TUG1_4.1-201ENST00000619464 181 ntBASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 Y_RNA.24-201ENST00000362508 103 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 Y_RNA.40-201ENST00000362645 93 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 RNU6-1205P-201ENST00000363625 106 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 SNORA18.2-201ENST00000383865 132 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 AL133475.1-201ENST00000404414 305 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 AL591034.1-201ENST00000407447 340 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 AC004866.1-201ENST00000411748 78 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 RPL30P14-201ENST00000482744 348 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 RNU6-1007P-201ENST00000516586 107 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 RNU2-44P-201ENST00000516795 194 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 RNU6-971P-201ENST00000516920 106 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 AC026241.1-201ENST00000517873 2142 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 RPL17P51-201ENST00000605218 238 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 AC002076.2-201ENST00000617362 122 ntBASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC85AQ96PX6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 Y_RNA.71-201ENST00000362892 104 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 RNU6-1210P-201ENST00000363775 107 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 Y_RNA.261-201ENST00000364631 102 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 RNU6-144P-201ENST00000383951 107 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 RNA5SP504-201ENST00000410676 117 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 AL139281.1-201ENST00000422120 335 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 RNU7-23P-201ENST00000459465 62 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 RPS29P2-201ENST00000479278 136 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 AC145146.1-201ENST00000496370 254 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC85AQ96PX6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC85AQ96PX6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC85AQ96PX6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
CCDC85AQ96PX6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 RNU6-655P-201ENST00000362858 107 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 Y_RNA.172-201ENST00000363765 102 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 Y_RNA.218-201ENST00000364218 104 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 RNU4-10P-201ENST00000364383 140 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 Y_RNA.310-201ENST00000365063 113 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 Y_RNA.361-201ENST00000365515 120 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 SNORA48.2-201ENST00000390926 124 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 AL121914.1-201ENST00000450188 156 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 AC114982.1-201ENST00000469402 321 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 RN7SL330P-201ENST00000469709 307 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 RNU6-919P-201ENST00000516731 104 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 AC112693.2-201ENST00000556538 232 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 AL391813.1-201ENST00000603098 260 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 AP003355.3-201ENST00000623465 114 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 U6.115-201ENST00000636045 103 ntBASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC85AQ96PX6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 AC010889.1-201ENST00000566193 2666 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 AP002088.1-201ENST00000382740 395 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 RNU6-969P-201ENST00000383900 105 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 SNORD37.2-201ENST00000391075 66 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 RNU6-1211P-201ENST00000459179 105 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 RPS26P15-201ENST00000488067 348 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 AC093663.1-201ENST00000497190 394 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 MIR3646-201ENST00000578301 84 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 MIR7112-201ENST00000616126 65 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 MIR3658-201ENST00000636291 56 ntBASIC4.32□□□□□ -1.72
CCDC85AQ96PX6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 AC069528.2-201ENST00000624849 1991 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 AL049781.1-201ENST00000623195 3585 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 RNU6-834P-201ENST00000362367 110 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 RNU6-1048P-201ENST00000364054 107 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 RNU6-80P-201ENST00000384195 107 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 MIR128-1-201ENST00000384921 82 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 RNU6-1228P-201ENST00000391014 107 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 AC006461.1-201ENST00000412637 326 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 RN7SKP83-201ENST00000516512 178 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 MIR4724-201ENST00000579485 89 ntBASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 AL138880.2-201ENST00000616214 239 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms