Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PAX9P55771 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.94□□□□□ -2.1
PAX9P55771 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.94□□□□□ -2.1
PAX9P55771 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PAX9P55771 AC131280.1-202ENST00000624067 4211 ntBASIC1.93□□□□□ -2.1
PAX9P55771 RNU1-76P-201ENST00000362903 159 ntBASIC1.93□□□□□ -2.1
PAX9P55771 Y_RNA.216-201ENST00000364205 93 ntBASIC1.93□□□□□ -2.1
PAX9P55771 Y_RNA.314-201ENST00000365114 102 ntBASIC1.93□□□□□ -2.1
PAX9P55771 Y_RNA.428-201ENST00000384078 102 ntBASIC1.93□□□□□ -2.1
PAX9P55771 RNU6-541P-201ENST00000384709 110 ntBASIC1.93□□□□□ -2.1
PAX9P55771 MIR625-201ENST00000385047 85 ntBASIC1.93□□□□□ -2.1
PAX9P55771 MIR561-201ENST00000385216 97 ntBASIC1.93□□□□□ -2.1
PAX9P55771 EIF1P2-201ENST00000428233 350 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AC096644.2-201ENST00000429278 159 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.93□□□□□ -2.1
PAX9P55771 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AC004386.2-201ENST00000441858 148 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AC096638.1-201ENST00000444678 216 ntBASIC1.93□□□□□ -2.1
PAX9P55771 RNU7-169P-201ENST00000459456 61 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.93□□□□□ -2.1
PAX9P55771 ATP5EP1-201ENST00000510257 156 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.93□□□□□ -2.1
PAX9P55771 RNU6-1114P-201ENST00000516022 107 ntBASIC1.93□□□□□ -2.1
PAX9P55771 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.93□□□□□ -2.1
PAX9P55771 RNA5SP54-201ENST00000516951 92 ntBASIC1.93□□□□□ -2.1
PAX9P55771 SNORD116.3-201ENST00000517176 78 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.93□□□□□ -2.1
PAX9P55771 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.93□□□□□ -2.1
PAX9P55771 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.93□□□□□ -2.1
PAX9P55771 AC125232.2-201ENST00000592457 143 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AC007485.1-201ENST00000616755 206 ntBASIC1.93□□□□□ -2.1
PAX9P55771 AC005562.2-201ENST00000618264 111 ntBASIC1.93□□□□□ -2.1
PAX9P55771 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.93□□□□□ -2.1
PAX9P55771 AC134503.1-201ENST00000633048 54 ntBASIC1.93□□□□□ -2.1
PAX9P55771 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
PAX9P55771 ZNF72P-201ENST00000425869 1908 ntBASIC1.93□□□□□ -2.1
PAX9P55771 RNU6-525P-201ENST00000363685 104 ntBASIC1.92□□□□□ -2.1
PAX9P55771 RNU6-234P-201ENST00000365229 104 ntBASIC1.92□□□□□ -2.1
PAX9P55771 RNU6-281P-201ENST00000384212 103 ntBASIC1.92□□□□□ -2.1
PAX9P55771 MIR27B-201ENST00000385129 97 ntBASIC1.92□□□□□ -2.1
PAX9P55771 MIR548P-201ENST00000408336 84 ntBASIC1.92□□□□□ -2.1
PAX9P55771 Y_RNA.592-201ENST00000410274 109 ntBASIC1.92□□□□□ -2.1
PAX9P55771 MTND4P19-201ENST00000446659 478 ntBASIC1.92□□□□□ -2.1
PAX9P55771 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.92□□□□□ -2.1
PAX9P55771 Y_RNA.631-201ENST00000459607 101 ntBASIC1.92□□□□□ -2.1
PAX9P55771 AC104435.1-201ENST00000483483 166 ntBASIC1.92□□□□□ -2.1
PAX9P55771 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.92□□□□□ -2.1
PAX9P55771 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.92□□□□□ -2.1
PAX9P55771 RNU4-77P-201ENST00000516692 156 ntBASIC1.92□□□□□ -2.1
PAX9P55771 RNU2-44P-201ENST00000516795 194 ntBASIC1.92□□□□□ -2.1
PAX9P55771 RNU7-4P-201ENST00000516961 62 ntBASIC1.92□□□□□ -2.1
PAX9P55771 RNU6-667P-201ENST00000517186 102 ntBASIC1.92□□□□□ -2.1
PAX9P55771 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.92□□□□□ -2.1
PAX9P55771 GTF3AP2-201ENST00000557014 266 ntBASIC1.92□□□□□ -2.1
PAX9P55771 AC026470.2-201ENST00000561492 181 ntBASIC1.92□□□□□ -2.1
PAX9P55771 MIR5695-201ENST00000579717 85 ntBASIC1.92□□□□□ -2.1
PAX9P55771 AC092447.9-201ENST00000603395 144 ntBASIC1.92□□□□□ -2.1
PAX9P55771 SNORD58B-201ENST00000607313 66 ntBASIC1.92□□□□□ -2.1
PAX9P55771 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.92□□□□□ -2.1
PAX9P55771 TCL6_2.1-201ENST00000615162 119 ntBASIC1.92□□□□□ -2.1
PAX9P55771 AC012640.5-201ENST00000623897 319 ntBASIC1.92□□□□□ -2.1
PAX9P55771 MIR4272-201ENST00000635924 64 ntBASIC1.92□□□□□ -2.1
PAX9P55771 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PAX9P55771 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PAX9P55771 Y_RNA.80-201ENST00000362996 102 ntBASIC1.91□□□□□ -2.1
PAX9P55771 Y_RNA.128-201ENST00000363391 112 ntBASIC1.91□□□□□ -2.1
PAX9P55771 Y_RNA.148-201ENST00000363557 117 ntBASIC1.91□□□□□ -2.1
PAX9P55771 RNU6-743P-201ENST00000364151 106 ntBASIC1.91□□□□□ -2.1
PAX9P55771 RNU6-1227P-201ENST00000383981 107 ntBASIC1.91□□□□□ -2.1
PAX9P55771 RNU6-318P-201ENST00000384283 103 ntBASIC1.91□□□□□ -2.1
PAX9P55771 Y_RNA.485-201ENST00000384395 102 ntBASIC1.91□□□□□ -2.1
PAX9P55771 RNU1-148P-201ENST00000384472 162 ntBASIC1.91□□□□□ -2.1
PAX9P55771 SNORA69.1-201ENST00000390904 137 ntBASIC1.91□□□□□ -2.1
PAX9P55771 AC063976.3-201ENST00000426849 329 ntBASIC1.91□□□□□ -2.1
PAX9P55771 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.91□□□□□ -2.1
PAX9P55771 AC009238.1-201ENST00000442165 424 ntBASIC1.91□□□□□ -2.1
PAX9P55771 AC009237.6-201ENST00000446969 424 ntBASIC1.91□□□□□ -2.1
PAX9P55771 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.91□□□□□ -2.1
PAX9P55771 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.91□□□□□ -2.1
PAX9P55771 SNORD109B-201ENST00000458961 67 ntBASIC1.91□□□□□ -2.1
PAX9P55771 SNORD109A-201ENST00000459128 67 ntBASIC1.91□□□□□ -2.1
PAX9P55771 SNORA4.4-201ENST00000515921 135 ntBASIC1.91□□□□□ -2.1
PAX9P55771 RNU6-1198P-201ENST00000516904 67 ntBASIC1.91□□□□□ -2.1
PAX9P55771 Y_RNA.711-201ENST00000516993 102 ntBASIC1.91□□□□□ -2.1
PAX9P55771 RN7SKP295-201ENST00000517264 153 ntBASIC1.91□□□□□ -2.1
PAX9P55771 AC034114.1-201ENST00000520293 285 ntBASIC1.91□□□□□ -2.1
PAX9P55771 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.91□□□□□ -2.1
PAX9P55771 AC233702.2-202ENST00000562547 291 ntBASIC1.91□□□□□ -2.1
PAX9P55771 MIR5006-201ENST00000583027 110 ntBASIC1.91□□□□□ -2.1
PAX9P55771 MIR3171-201ENST00000584270 74 ntBASIC1.91□□□□□ -2.1
PAX9P55771 AL356055.1-201ENST00000602528 446 ntBASIC1.91□□□□□ -2.1
PAX9P55771 AC022202.1-201ENST00000613515 211 ntBASIC1.91□□□□□ -2.1
PAX9P55771 U4.3-201ENST00000621047 82 ntBASIC1.91□□□□□ -2.1
PAX9P55771 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.91□□□□□ -2.1
PAX9P55771 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PAX9P55771 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
PAX9P55771 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.1
PAX9P55771 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PAX9P55771 AL596028.1-201ENST00000326971 197 ntBASIC1.9□□□□□ -2.11
PAX9P55771 RNA5SP361-201ENST00000362686 118 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms