Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RN7SL863P-201ENST00000462370 296 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.43□□□□□ -1.86
EPHB3P54753 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.43□□□□□ -1.86
EPHB3P54753 RNU6-919P-201ENST00000516731 104 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 MIR4431-201ENST00000579990 94 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 AC090616.3-201ENST00000582184 217 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.43□□□□□ -1.86
EPHB3P54753 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
EPHB3P54753 ADAM3A-203ENST00000461344 2157 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
EPHB3P54753 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
EPHB3P54753 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 SNORD116-14-201ENST00000383894 92 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 SNORD116-17-201ENST00000383929 92 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 SNORD116-15-201ENST00000384445 92 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 SNORD116-19-201ENST00000384729 92 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 NDUFS5P4-201ENST00000412983 318 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.42□□□□□ -1.86
EPHB3P54753 MTND4LP9-201ENST00000427694 174 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.42□□□□□ -1.86
EPHB3P54753 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
EPHB3P54753 Y_RNA.797-201ENST00000515977 94 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 RN7SKP164-201ENST00000516138 266 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.42□□□□□ -1.86
EPHB3P54753 AC009163.5-201ENST00000575421 637 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.42□□□□□ -1.86
EPHB3P54753 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 MIR3674-201ENST00000636576 68 ntBASIC3.42□□□□□ -1.86
EPHB3P54753 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.42□□□□□ -1.86
EPHB3P54753 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
EPHB3P54753 MIR422A-201ENST00000362286 90 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU1-70P-201ENST00000362618 164 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU6-103P-201ENST00000363686 107 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU6-899P-201ENST00000363947 107 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU6-487P-201ENST00000365430 104 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU6-44P-201ENST00000384045 107 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU6-763P-201ENST00000390865 106 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RPL30P13-201ENST00000418873 348 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RPL23AP82-202ENST00000427528 469 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RPS20P10-201ENST00000451209 253 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNA5SP310-201ENST00000459084 116 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 CENPBD1P1-201ENST00000464061 469 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 AC006445.1-201ENST00000491925 405 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU6-1333P-201ENST00000516162 93 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNA5SP341-201ENST00000516261 117 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 SCARNA13-201ENST00000516672 275 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 RNU2-12P-201ENST00000517216 168 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.41□□□□□ -1.86
EPHB3P54753 MIR4474-201ENST00000579189 78 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 AL359881.1-201ENST00000602916 267 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.41□□□□□ -1.86
EPHB3P54753 AC002076.2-201ENST00000617362 122 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 AC018692.3-201ENST00000623929 123 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.41□□□□□ -1.86
EPHB3P54753 MIR3529-201ENST00000637713 78 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 AC093010.3-201ENST00000570269 15214 ntBASIC3.41□□□□□ -1.86
EPHB3P54753 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.41□□□□□ -1.86
EPHB3P54753 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
EPHB3P54753 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
EPHB3P54753 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
EPHB3P54753 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHB3P54753 RNU1-62P-201ENST00000362599 164 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 Y_RNA.71-201ENST00000362892 104 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 RNU6-884P-201ENST00000363889 107 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 Y_RNA.329-201ENST00000365209 107 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.4□□□□□ -1.87
EPHB3P54753 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHB3P54753 AC096649.2-201ENST00000416186 393 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 HMGN2P20-201ENST00000437531 273 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 AC074290.1-201ENST00000448883 135 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.4□□□□□ -1.87
EPHB3P54753 S100A11P2-201ENST00000467589 312 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 RPS27AP10-201ENST00000496103 208 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 RNU6-971P-201ENST00000516920 106 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 DEFB131C-201ENST00000528817 165 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.4□□□□□ -1.87
EPHB3P54753 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.4□□□□□ -1.87
EPHB3P54753 MIR4744-201ENST00000581563 82 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 AC090897.2-201ENST00000581715 130 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 AL451007.1-201ENST00000595491 289 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 XIST_intron.1-201ENST00000619444 68 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 U6.98-201ENST00000637157 84 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.4□□□□□ -1.87
EPHB3P54753 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.87
EPHB3P54753 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHB3P54753 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHB3P54753 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
EPHB3P54753 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.39□□□□□ -1.87
EPHB3P54753 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.39□□□□□ -1.87
EPHB3P54753 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
EPHB3P54753 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHB3P54753 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHB3P54753 RNU6-153P-201ENST00000364422 104 ntBASIC3.39□□□□□ -1.87
EPHB3P54753 RNU4-11P-201ENST00000365287 132 ntBASIC3.39□□□□□ -1.87
EPHB3P54753 RNU6-622P-201ENST00000384272 103 ntBASIC3.39□□□□□ -1.87
EPHB3P54753 SNORA1.3-201ENST00000384676 136 ntBASIC3.39□□□□□ -1.87
EPHB3P54753 RNU6-376P-201ENST00000384731 106 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 263.5 ms