Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MIR5690-201ENST00000583739 73 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 AC010928.2-201ENST00000588017 287 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HDAC3O15379 AC078795.3-201ENST00000602913 472 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 AC073410.2-201ENST00000603240 332 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 AL078605.1-201ENST00000603529 500 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 AL353621.2-201ENST00000605340 133 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.78□□□□□ -2.12
HDAC3O15379 MIR8076-201ENST00000611401 83 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 PISRT1.1-201ENST00000616930 107 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
HDAC3O15379 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
HDAC3O15379 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HDAC3O15379 SNORD114-19-201ENST00000363072 75 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 Y_RNA.216-201ENST00000364205 93 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 RNU6-933P-201ENST00000384424 107 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 RNU1-57P-201ENST00000384491 166 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 RNU6-1222P-201ENST00000384615 107 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 MIR559-201ENST00000385188 96 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 RNU6-308P-201ENST00000390957 107 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 SNORA75.6-201ENST00000391318 127 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 RNU6-1245P-201ENST00000411130 106 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 RN7SKP192-201ENST00000411291 327 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 AC097463.2-201ENST00000421074 142 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 MTCO2P12-201ENST00000427426 682 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 AL353997.1-201ENST00000432936 108 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 MTCYBP6-201ENST00000441810 138 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.77□□□□□ -2.13
HDAC3O15379 AL441985.1-201ENST00000457727 251 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 snoU13.14-201ENST00000459372 104 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 RPS29P21-201ENST00000496272 170 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 AC022447.4-201ENST00000504053 364 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 AC107393.1-201ENST00000512403 346 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 HSPE1P4-201ENST00000550617 308 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 AL080274.1-201ENST00000605565 220 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 AC005014.2-201ENST00000607795 599 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.77□□□□□ -2.13
HDAC3O15379 AC009541.1-201ENST00000438279 2662 ntBASIC1.77□□□□□ -2.13
HDAC3O15379 RNU6-1115P-201ENST00000362490 106 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 RNU6-486P-201ENST00000363116 107 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 Y_RNA.187-201ENST00000363918 113 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 RNU6-1141P-201ENST00000364520 107 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 RNU6-1032P-201ENST00000384100 107 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 RNU6-1106P-201ENST00000390845 107 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 SNORA26.3-201ENST00000391119 136 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 USMG5P1-201ENST00000425964 177 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.76□□□□□ -2.13
HDAC3O15379 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.76□□□□□ -2.13
HDAC3O15379 AL353752.1-201ENST00000454946 260 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 Y_RNA.639-201ENST00000458981 102 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 RPL30P1-201ENST00000488676 339 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 AC140059.1-201ENST00000489238 361 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 RNA5SP112-201ENST00000515937 99 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 RNU5F-2P-201ENST00000516066 82 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.76□□□□□ -2.13
HDAC3O15379 CBX3P4-201ENST00000538909 354 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.76□□□□□ -2.13
HDAC3O15379 AC020661.2-201ENST00000560114 134 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 DEFB122-202ENST00000569013 197 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 MIR4648-201ENST00000580107 72 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.76□□□□□ -2.13
HDAC3O15379 AL713866.2-201ENST00000603579 219 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 AC009318.2-201ENST00000610917 651 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 AL773524.1-201ENST00000614065 229 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 AC002543.1-201ENST00000299783 1954 ntBASIC1.76□□□□□ -2.13
HDAC3O15379 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
HDAC3O15379 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HDAC3O15379 Y_RNA.5-201ENST00000362334 102 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 Y_RNA.146-201ENST00000363549 102 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 RNU4-42P-201ENST00000364738 142 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 RNU6-596P-201ENST00000365395 98 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 RNU6-1040P-201ENST00000383974 107 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 Y_RNA.431-201ENST00000384086 102 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 RNU6-784P-201ENST00000384330 106 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 Y_RNA.496-201ENST00000384444 101 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 Y_RNA.504-201ENST00000384481 104 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HDAC3O15379 AL591034.2-201ENST00000402839 359 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 RN7SKP61-201ENST00000410642 295 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 AC244636.1-201ENST00000421152 228 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 MRPS18CP6-201ENST00000423587 223 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 AF186996.7-201ENST00000492781 209 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 AC022493.2-201ENST00000506122 481 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 RNU6-470P-201ENST00000515954 104 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 ACA59.1-201ENST00000515966 143 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 RNU2-53P-201ENST00000516257 147 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.75□□□□□ -2.13
HDAC3O15379 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.75□□□□□ -2.13
HDAC3O15379 MIR5696-201ENST00000578474 85 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 MIR4298-201ENST00000584380 73 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 MIR4719-201ENST00000585233 84 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.75□□□□□ -2.13
HDAC3O15379 AC018889.1-201ENST00000605372 397 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 AC096772.1-201ENST00000609146 564 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms