Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 U6.104-201ENST00000637979 90 ntBASIC3□□□□□ -1.93
PNKPQ96T60 MTND5P6-201ENST00000422338 1798 ntBASIC3□□□□□ -1.93
PNKPQ96T60 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PNKPQ96T60 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.99□□□□□ -1.93
PNKPQ96T60 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PNKPQ96T60 Y_RNA.489-201ENST00000384410 101 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PNKPQ96T60 SNORD12B-201ENST00000410433 91 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 ARL5AP4-201ENST00000430731 512 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 HMGN2P20-201ENST00000437531 273 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 Y_RNA.713-201ENST00000517013 96 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.99□□□□□ -1.93
PNKPQ96T60 AC004486.1-201ENST00000546846 233 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 MIR3162-201ENST00000581818 82 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
PNKPQ96T60 AL138963.2-201ENST00000605137 226 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 RNU6-91P-201ENST00000607774 107 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.99□□□□□ -1.93
PNKPQ96T60 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PNKPQ96T60 LINC02555-201ENST00000563933 1951 ntBASIC2.99□□□□□ -1.93
PNKPQ96T60 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PNKPQ96T60 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PNKPQ96T60 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
PNKPQ96T60 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.98□□□□□ -1.93
PNKPQ96T60 SNORA18.3-201ENST00000384122 132 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 RNU6-1203P-201ENST00000410703 110 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 CYCSP48-201ENST00000417124 323 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 AC087499.2-201ENST00000432861 149 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.98□□□□□ -1.93
PNKPQ96T60 AC112771.1-201ENST00000463581 102 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 HMGB1P35-201ENST00000503360 598 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.98□□□□□ -1.93
PNKPQ96T60 RN7SKP132-201ENST00000516001 208 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 RNU6-711P-201ENST00000517255 106 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.98□□□□□ -1.93
PNKPQ96T60 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.98□□□□□ -1.93
PNKPQ96T60 AC012433.1-201ENST00000588916 398 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 AP001282.2-201ENST00000616149 309 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 SDR42E1P4-201ENST00000620894 481 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 AC078938.1-201ENST00000620993 318 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.98□□□□□ -1.93
PNKPQ96T60 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.98□□□□□ -1.93
PNKPQ96T60 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PNKPQ96T60 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
PNKPQ96T60 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PNKPQ96T60 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PNKPQ96T60 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PNKPQ96T60 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PNKPQ96T60 RNU6-1010P-201ENST00000362757 107 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 Y_RNA.60-201ENST00000362831 98 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 SNORD114-19-201ENST00000363072 75 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 RNU6-137P-201ENST00000363680 108 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 RNU6-873P-201ENST00000363833 107 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 SNORD115-8-201ENST00000363856 82 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 SNORA14A-201ENST00000364773 135 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 SNORD115-38-201ENST00000365037 82 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 MIR329-1-201ENST00000385028 80 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 MRPL35P1-201ENST00000404272 572 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 Y_RNA.602-201ENST00000410535 92 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 RNA5SP184-201ENST00000411071 108 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.97□□□□□ -1.93
PNKPQ96T60 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.97□□□□□ -1.93
PNKPQ96T60 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.97□□□□□ -1.93
PNKPQ96T60 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.97□□□□□ -1.93
PNKPQ96T60 RPL39P38-201ENST00000467018 153 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 AC107222.1-201ENST00000510899 637 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 RN7SKP49-201ENST00000516675 260 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 RNU6-826P-201ENST00000516827 104 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 RNU6-1198P-201ENST00000516904 67 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PNKPQ96T60 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.97□□□□□ -1.93
PNKPQ96T60 MIR4319-201ENST00000577285 85 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PNKPQ96T60 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PNKPQ96T60 AC092593.1-201ENST00000515413 1815 ntBASIC2.97□□□□□ -1.93
PNKPQ96T60 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PNKPQ96T60 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.97□□□□□ -1.93
PNKPQ96T60 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PNKPQ96T60 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PNKPQ96T60 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
PNKPQ96T60 Y_RNA.562-201ENST00000384695 113 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 MIR767-201ENST00000390228 109 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 RNU6-1093P-201ENST00000391194 107 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 MIR208B-201ENST00000401172 77 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 RNU6-847P-201ENST00000411115 108 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 RPS26P42-201ENST00000413485 326 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.96□□□□□ -1.94
PNKPQ96T60 AC096920.1-201ENST00000423991 241 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 AC009414.1-201ENST00000427200 443 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 AC010095.1-201ENST00000443543 144 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.96□□□□□ -1.94
PNKPQ96T60 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.96□□□□□ -1.94
PNKPQ96T60 RPS27P26-201ENST00000494583 239 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 Y_RNA.673-201ENST00000516306 88 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 SNORA9.3-201ENST00000516383 129 ntBASIC2.96□□□□□ -1.94
PNKPQ96T60 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.96□□□□□ -1.94
PNKPQ96T60 CYP4A27P-201ENST00000567218 190 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms