Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 DAP3P1-201ENST00000441522 278 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 RPL30P15-201ENST00000457129 321 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 AC145146.1-201ENST00000496370 254 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 SNORA4.4-201ENST00000515921 135 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 ACA59.1-201ENST00000515966 143 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 SCARNA16.2-201ENST00000516520 172 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 Y_RNA.708-201ENST00000516950 96 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 AC021231.3-201ENST00000558497 370 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 MIR3923-201ENST00000579521 83 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 AL049779.4-201ENST00000604500 156 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 AC010297.1-201ENST00000623948 149 ntBASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
LYSMD4Q5XG99 Y_RNA.238-201ENST00000364441 102 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 Y_RNA.259-201ENST00000364619 101 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 RNU6-784P-201ENST00000384330 106 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 SNORA12-201ENST00000391162 147 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 EDDM3CP-201ENST00000415977 425 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 AL353997.1-201ENST00000432936 108 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 AF186996.7-201ENST00000492781 209 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 AC021146.2-201ENST00000504736 556 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 Y_RNA.718-201ENST00000517110 102 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 AC018630.3-201ENST00000542637 96 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 MIR4273-201ENST00000582824 84 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 Z98751.3-201ENST00000604447 521 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 AC098657.3-201ENST00000620434 263 ntBASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LYSMD4Q5XG99 Y_RNA.61-201ENST00000362835 102 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 Y_RNA.384-201ENST00000383909 102 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 RNU6-1297P-201ENST00000384415 104 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 SNORA46.1-201ENST00000391069 153 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 NCOR1P3-201ENST00000420479 303 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 CBX3P6-201ENST00000430257 527 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 MTND3P23-201ENST00000431980 347 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 RNU6-965P-201ENST00000516721 96 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 RNU6-567P-201ENST00000516746 107 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 RNU6-667P-201ENST00000517186 102 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC034114.1-201ENST00000520293 285 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC022616.8-201ENST00000533569 253 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC010928.2-201ENST00000588017 287 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AP000942.3-201ENST00000603702 160 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AL133255.1-201ENST00000606374 441 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 MIR6845-201ENST00000613182 61 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC022202.1-201ENST00000613515 211 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 PISRT1.1-201ENST00000616930 107 ntBASIC2.09□□□□□ -2.07
LYSMD4Q5XG99 AC006026.1-201ENST00000444025 1803 ntBASIC2.09□□□□□ -2.08
LYSMD4Q5XG99 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
LYSMD4Q5XG99 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 MTND5P9-201ENST00000503854 1755 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 RNU6-593P-201ENST00000364716 112 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 Y_RNA.394-201ENST00000383942 103 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 RNU6-968P-201ENST00000384076 107 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 MT-TD-201ENST00000387419 68 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 RNY4P36-201ENST00000391116 96 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 MTCYBP4-201ENST00000401524 249 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 MTCYBP2-201ENST00000407745 171 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 RNA5SP247-201ENST00000411181 105 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 AC243428.1-201ENST00000421099 264 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 MTCO3P29-201ENST00000432119 779 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 SNORD19B-201ENST00000459623 84 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 RPL23AP75-201ENST00000491601 451 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 AC016256.1-201ENST00000547971 354 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 AC005014.2-201ENST00000607795 599 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 AC233981.2-201ENST00000611524 1614 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 MTND4P29-201ENST00000503122 1372 ntBASIC2.08□□□□□ -2.08
LYSMD4Q5XG99 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.07□□□□□ -2.08
LYSMD4Q5XG99 ZNF355P-201ENST00000427301 3216 ntBASIC2.07□□□□□ -2.08
LYSMD4Q5XG99 MIR6073-201ENST00000352083 89 ntBASIC2.07□□□□□ -2.08
LYSMD4Q5XG99 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
LYSMD4Q5XG99 RNU6-797P-201ENST00000363101 109 ntBASIC2.07□□□□□ -2.08
LYSMD4Q5XG99 RNU6-1286P-201ENST00000383871 107 ntBASIC2.07□□□□□ -2.08
LYSMD4Q5XG99 RNU6-890P-201ENST00000384121 107 ntBASIC2.07□□□□□ -2.08
LYSMD4Q5XG99 RNU6-378P-201ENST00000384324 107 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms