Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MIR3976-201ENST00000606807 139 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AC093913.1-201ENST00000614178 329 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 SCARNA4-201ENST00000629045 128 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
HMGCLP35914 AP006437.1-201ENST00000641440 3685 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 AL356292.1-201ENST00000283110 373 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 RNU6-1159P-201ENST00000362933 107 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 SNORD115-8-201ENST00000363856 82 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 SNORD115-38-201ENST00000365037 82 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 RNU6-842P-201ENST00000384269 107 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 Y_RNA.474-201ENST00000384341 102 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 Y_RNA.504-201ENST00000384481 104 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 SNORA40.18-201ENST00000391200 128 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 AL356432.1-201ENST00000405809 419 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 Y_RNA.597-201ENST00000410463 100 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 AC243428.1-201ENST00000421099 264 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 AL139396.1-201ENST00000421137 167 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 RPS3AP52-201ENST00000435639 297 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 AC010095.1-201ENST00000443543 144 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCLP35914 YWHAEP4-201ENST00000505390 198 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCLP35914 MRPS36P4-201ENST00000534436 298 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCLP35914 EIF4A1P12-201ENST00000551910 141 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCLP35914 AC018462.2-201ENST00000605375 395 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 AC019193.3-201ENST00000609144 554 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.79□□□□□ -2.12
HMGCLP35914 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCLP35914 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HMGCLP35914 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 MTND4P12-201ENST00000498999 1377 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 Y_RNA.123-201ENST00000363338 102 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 SNORD115-32-201ENST00000364079 82 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 RNU6-234P-201ENST00000365229 104 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMGCLP35914 RNU6-546P-201ENST00000383991 107 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 U8.10-201ENST00000384260 133 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 RNY3P14-201ENST00000384309 102 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AC074085.1-201ENST00000413598 418 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 NCOR1P3-201ENST00000420479 303 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AL358453.1-201ENST00000422522 250 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AC098614.3-201ENST00000438957 440 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AC009238.1-201ENST00000442165 424 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AC009237.6-201ENST00000446969 424 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 MTND3P10-201ENST00000450967 341 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 PPP1R2P5-201ENST00000457256 603 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AC132942.1-201ENST00000486753 483 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 RPL23AP75-201ENST00000491601 451 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGCLP35914 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 MIR4790-201ENST00000577799 79 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 POLR3GP2-201ENST00000588366 668 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AC011494.1-201ENST00000596454 237 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AL158827.2-201ENST00000602494 330 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 RPL17P51-201ENST00000605218 238 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 uc_338.5-201ENST00000611839 155 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 MIR6845-201ENST00000613182 61 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 AL691447.3-201ENST00000635020 330 ntBASIC1.78□□□□□ -2.12
HMGCLP35914 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.13
HMGCLP35914 ZNF702P-202ENST00000434269 1966 ntBASIC1.78□□□□□ -2.13
HMGCLP35914 RNU1-76P-201ENST00000362903 159 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 U3.9-201ENST00000363823 204 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 RNU6-378P-201ENST00000384324 107 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 Y_RNA.482-201ENST00000384377 111 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 RNU6-933P-201ENST00000384424 107 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 MIR521-1-201ENST00000384902 87 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 SNORA26.9-201ENST00000391322 122 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 MIR548F5-201ENST00000408421 86 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 RNU2-32P-201ENST00000411193 191 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 USP9YP30-201ENST00000430729 455 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 AL353572.1-201ENST00000442490 417 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGCLP35914 AC103851.1-201ENST00000506833 274 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGCLP35914 FGF7P4-201ENST00000509595 295 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGCLP35914 RNU6-1016P-201ENST00000516689 94 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 RNU6-295P-201ENST00000516901 104 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 MIR3126-201ENST00000577443 74 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 UBE2V2P2-201ENST00000587677 504 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 AL359314.1-201ENST00000616913 261 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGCLP35914 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGCLP35914 MIR1248-201ENST00000629190 106 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.77□□□□□ -2.13
HMGCLP35914 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HMGCLP35914 SNORA72.1-201ENST00000363485 129 ntBASIC1.76□□□□□ -2.13
HMGCLP35914 RNU4-56P-201ENST00000364700 142 ntBASIC1.76□□□□□ -2.13
HMGCLP35914 RNU6-968P-201ENST00000384076 107 ntBASIC1.76□□□□□ -2.13
HMGCLP35914 Y_RNA.490-201ENST00000384413 102 ntBASIC1.76□□□□□ -2.13
HMGCLP35914 MIR1289-2-201ENST00000408360 111 ntBASIC1.76□□□□□ -2.13
HMGCLP35914 EDDM3CP-201ENST00000415977 425 ntBASIC1.76□□□□□ -2.13
HMGCLP35914 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGCLP35914 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 240 ms