Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.54□□□□□ -2.16
NPAS2Q99743 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.54□□□□□ -2.16
NPAS2Q99743 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.54□□□□□ -2.16
NPAS2Q99743 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.54□□□□□ -2.16
NPAS2Q99743 AK3P2-201ENST00000507976 429 ntBASIC1.54□□□□□ -2.16
NPAS2Q99743 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.54□□□□□ -2.16
NPAS2Q99743 AC016957.1-201ENST00000534895 309 ntBASIC1.54□□□□□ -2.16
NPAS2Q99743 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.54□□□□□ -2.16
NPAS2Q99743 AC016925.2-201ENST00000605108 242 ntBASIC1.54□□□□□ -2.16
NPAS2Q99743 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
NPAS2Q99743 AC092807.2-201ENST00000609367 243 ntBASIC1.54□□□□□ -2.16
NPAS2Q99743 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.54□□□□□ -2.16
NPAS2Q99743 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.54□□□□□ -2.16
NPAS2Q99743 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NPAS2Q99743 MIR378A-201ENST00000362177 66 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 Y_RNA.38-201ENST00000362617 102 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 U3.9-201ENST00000363823 204 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 Y_RNA.554-201ENST00000384672 102 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NPAS2Q99743 FGF7P8-201ENST00000402994 292 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 AL590002.1-201ENST00000406554 418 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.53□□□□□ -2.16
NPAS2Q99743 MTCO3P46-201ENST00000425787 232 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.53□□□□□ -2.16
NPAS2Q99743 AC010409.1-201ENST00000487382 476 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 MTND5P9-201ENST00000503854 1755 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 Y_RNA.673-201ENST00000516306 88 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 RNU6-720P-201ENST00000516363 108 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 RNU6-567P-201ENST00000516746 107 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 SNORA31.17-201ENST00000516953 127 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.53□□□□□ -2.16
NPAS2Q99743 AC109446.1-201ENST00000566172 220 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 AC010525.2-201ENST00000590920 195 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 RPL17P51-201ENST00000605218 238 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 AC064807.4-201ENST00000607201 407 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 MIR8074-201ENST00000615081 81 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 AC103705.1-201ENST00000619013 241 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 AC022513.1-201ENST00000624512 117 ntBASIC1.53□□□□□ -2.16
NPAS2Q99743 OR4G1P-203ENST00000641984 1631 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 MTND4P23-201ENST00000447723 1363 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 MIR126-201ENST00000362291 85 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 Y_RNA.167-201ENST00000363735 109 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 Y_RNA.516-201ENST00000384541 124 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 MIR514A2-201ENST00000385131 88 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 MIR514A3-201ENST00000385132 88 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 RNU4-62P-201ENST00000410125 130 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 RNU6-908P-201ENST00000410160 94 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.52□□□□□ -2.17
NPAS2Q99743 TIMM9P3-201ENST00000428659 274 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.52□□□□□ -2.17
NPAS2Q99743 SEPT14P3-201ENST00000439401 183 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AL732372.2-207ENST00000445840 183 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.52□□□□□ -2.17
NPAS2Q99743 SEPT14P2-201ENST00000453405 183 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 RNU7-138P-201ENST00000459479 64 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AC087477.1-201ENST00000465747 340 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AC083904.1-201ENST00000487828 231 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AC025465.3-201ENST00000510570 311 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AC091874.1-201ENST00000511402 339 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 SEPT14P4-201ENST00000513445 186 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 RNU6-323P-201ENST00000521915 107 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 FO082796.1-201ENST00000523795 183 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AC104576.1-201ENST00000524225 88 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AP005597.4-201ENST00000526762 229 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AC025423.5-201ENST00000550230 219 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AC021231.3-201ENST00000558497 370 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.52□□□□□ -2.17
NPAS2Q99743 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.52□□□□□ -2.17
NPAS2Q99743 AC004492.1-201ENST00000607036 742 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 snoU13.31-201ENST00000607291 104 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 AL357078.3-201ENST00000607528 618 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 PCGEM1.1-201ENST00000613431 131 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NPAS2Q99743 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
NPAS2Q99743 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
NPAS2Q99743 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.51□□□□□ -2.17
NPAS2Q99743 MIR340-201ENST00000362125 95 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 Y_RNA.231-201ENST00000364358 102 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 RNU6-522P-201ENST00000364497 107 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 SNORA32.2-201ENST00000384049 122 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NPAS2Q99743 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.51□□□□□ -2.17
NPAS2Q99743 BTF3P4-201ENST00000418852 495 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.51□□□□□ -2.17
NPAS2Q99743 RNU6-1208P-201ENST00000459588 107 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 AC007547.1-201ENST00000462177 490 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 Y_RNA.654-201ENST00000497848 106 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 Y_RNA.655-201ENST00000515919 96 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 SNORA19.2-201ENST00000516013 114 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 EIF4A1P12-201ENST00000551910 141 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.51□□□□□ -2.17
NPAS2Q99743 CYP4A27P-201ENST00000567218 190 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 MIR4781-201ENST00000585250 76 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 MIR5692C1-201ENST00000585309 91 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 AC078795.3-201ENST00000602913 472 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 AL162413.1-201ENST00000603198 110 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 AP001836.1-201ENST00000604675 523 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms