Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RPS15AP7-201ENST00000439294 405 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 MTND4P19-201ENST00000446659 478 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RNU7-87P-201ENST00000459343 62 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RPL23AP70-201ENST00000483361 460 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RNA5SP282-201ENST00000516355 108 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 DEFB122-202ENST00000569013 197 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 AL138825.1-201ENST00000618587 192 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 MIR29B2-201ENST00000385055 81 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RPL21P75-201ENST00000396599 483 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RPL21P28-201ENST00000401418 483 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RNU2-25P-201ENST00000411041 191 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RNA5SP344-201ENST00000411081 104 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RPL23AP22-201ENST00000437556 453 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RPL21P39-201ENST00000463605 483 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 AC003982.1-202ENST00000469928 248 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 AC087190.1-201ENST00000484462 480 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 AC093591.1-201ENST00000491435 481 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RPL21P16-201ENST00000495531 483 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 AC108210.2-201ENST00000503681 201 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 SNORA25.10-201ENST00000515926 124 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 HSPE1P20-201ENST00000538133 289 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 AC007485.1-201ENST00000616755 206 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 AC069528.2-201ENST00000624849 1991 ntBASIC2.89□□□□□ -1.95
TRIM43Q96BQ3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.148-201ENST00000363557 117 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 RNU4-42P-201ENST00000364738 142 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 SNORA33.2-201ENST00000365413 134 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.422-201ENST00000384054 114 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 MIR628-201ENST00000385229 95 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 RN7SKP58-201ENST00000411010 305 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 AL353752.1-201ENST00000454946 260 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 RNU7-169P-201ENST00000459456 61 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 AC145146.1-201ENST00000496370 254 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 ANP32BP3-201ENST00000559213 706 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 AC040896.1-201ENST00000613819 479 ntBASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TRIM43Q96BQ3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AL161431.1-201ENST00000618966 4205 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 RNU4-15P-201ENST00000362613 141 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 RNA5SP99-201ENST00000364020 114 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 RNU6-461P-201ENST00000364195 107 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.319-201ENST00000365138 92 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 U8.10-201ENST00000384260 133 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 MIR518C-201ENST00000384822 101 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 MIR627-201ENST00000384979 97 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 HMGB3P2-201ENST00000411913 584 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AC114482.1-201ENST00000418010 247 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 USP9YP16-201ENST00000430287 407 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 USP9YP23-201ENST00000455085 407 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AC080013.2-201ENST00000460866 323 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 SRIP1-201ENST00000489235 288 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 CKS1BP2-201ENST00000497342 240 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 GNAI2P1-201ENST00000541815 315 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 MIR3616-201ENST00000584070 92 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AC006504.6-201ENST00000590142 199 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AC090115.4-201ENST00000609970 188 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AC005520.5-201ENST00000613926 164 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 AL606534.2-204ENST00000635008 178 ntBASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM43Q96BQ3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 MIR26A1-201ENST00000362205 77 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 RNU6-874P-201ENST00000362390 105 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 RNY3P11-201ENST00000364153 102 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 RNU6-639P-201ENST00000384074 107 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 SNORA46-201ENST00000384762 135 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms