Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GRIK1P39086 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.9□□□□□ -1.79
GRIK1P39086 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
GRIK1P39086 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
GRIK1P39086 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.89□□□□□ -1.79
GRIK1P39086 RNU6-727P-201ENST00000363592 107 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 RNU6-137P-201ENST00000363680 108 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 U3.37-201ENST00000408528 213 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 AC017083.1-201ENST00000428093 483 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 AC112220.1-201ENST00000434628 355 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 GPM6BP3-201ENST00000442797 145 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.89□□□□□ -1.79
GRIK1P39086 AC091179.3-201ENST00000474761 144 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 RPL32P34-201ENST00000486380 400 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.89□□□□□ -1.79
GRIK1P39086 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.89□□□□□ -1.79
GRIK1P39086 HIGD1AP1-201ENST00000550979 275 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.89□□□□□ -1.79
GRIK1P39086 MIR3609-201ENST00000582661 80 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 AL138963.2-201ENST00000605137 226 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 AL591926.4-201ENST00000616895 298 ntBASIC3.89□□□□□ -1.79
GRIK1P39086 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.89□□□□□ -1.79
GRIK1P39086 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
GRIK1P39086 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GRIK1P39086 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GRIK1P39086 AP001486.2-201ENST00000561652 5113 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
GRIK1P39086 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GRIK1P39086 MIR450A1-201ENST00000362262 91 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 SNORD56.1-201ENST00000362913 68 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 RNU6-969P-201ENST00000383900 105 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 RNU6-643P-201ENST00000384018 107 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 MIR518D-201ENST00000385014 87 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 ATP5A1P2-201ENST00000412323 255 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 RPS29P4-201ENST00000414733 161 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
GRIK1P39086 AL121914.1-201ENST00000450188 156 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 AC106707.2-201ENST00000484182 374 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 RNU6-703P-201ENST00000516946 107 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 AL391261.4-201ENST00000616012 481 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 AC012314.7-201ENST00000619693 93 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 AC244205.2-202ENST00000635781 342 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 MIR6844-201ENST00000637122 62 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 AP000553.6-201ENST00000641242 118 ntBASIC3.88□□□□□ -1.79
GRIK1P39086 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
GRIK1P39086 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.88□□□□□ -1.79
GRIK1P39086 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
GRIK1P39086 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GRIK1P39086 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GRIK1P39086 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GRIK1P39086 Y_RNA.179-201ENST00000363844 90 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 RNU6-324P-201ENST00000363957 106 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 RNU6-454P-201ENST00000364292 107 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 RNU6-1164P-201ENST00000364428 107 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 RNU6-142P-201ENST00000384019 107 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 SNORA8.3-201ENST00000384679 139 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.87□□□□□ -1.79
GRIK1P39086 AL512633.1-201ENST00000399931 655 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 U3.40-201ENST00000408706 208 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 RNY4P30-201ENST00000410216 95 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 AL159169.1-201ENST00000421119 127 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 AIMP1P2-201ENST00000425294 312 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 HMGN2P31-201ENST00000432430 273 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 HMGB3P8-201ENST00000449709 577 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 AC006445.2-201ENST00000510061 472 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
GRIK1P39086 HSPE1P4-201ENST00000550617 308 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 AC012640.5-201ENST00000623897 319 ntBASIC3.87□□□□□ -1.79
GRIK1P39086 AC010329.5-201ENST00000623497 2174 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 AC008555.8-201ENST00000623602 2168 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GRIK1P39086 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GRIK1P39086 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GRIK1P39086 SNORD73B-201ENST00000364394 72 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 Y_RNA.333-201ENST00000365274 102 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 Y_RNA.369-201ENST00000365568 117 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 MIR15B-201ENST00000385045 98 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
GRIK1P39086 PTMAP5-201ENST00000393073 333 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 AL512604.1-201ENST00000404812 257 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 AC096649.2-201ENST00000416186 393 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 HMGN2P30-201ENST00000423237 256 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 AC007969.2-201ENST00000441891 191 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 RPL30P14-201ENST00000482744 348 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 Y_RNA.694-201ENST00000516677 117 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 RNU2-12P-201ENST00000517216 168 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.86□□□□□ -1.79
GRIK1P39086 AC019176.2-201ENST00000611579 315 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 AL078604.3-201ENST00000615580 211 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 MIR3674-201ENST00000636576 68 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 U2.21-201ENST00000637295 81 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GRIK1P39086 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GRIK1P39086 AL136164.4-201ENST00000625013 2135 ntBASIC3.86□□□□□ -1.79
GRIK1P39086 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GRIK1P39086 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.86□□□□□ -1.79
GRIK1P39086 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
GRIK1P39086 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
GRIK1P39086 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms