Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 Z98751.3-201ENST00000604447 521 ntBASIC1.84□□□□□ -2.11
HMGCLP35914 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.84□□□□□ -2.11
HMGCLP35914 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGCLP35914 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.12
HMGCLP35914 Y_RNA.160-201ENST00000363677 92 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 RNU6-1032P-201ENST00000384100 107 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 MIR561-201ENST00000385216 97 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HMGCLP35914 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HMGCLP35914 BTF3L4P2-201ENST00000392798 346 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 RNU6-174P-201ENST00000410406 106 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 AL590135.1-201ENST00000422215 156 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 EIF4EP2-201ENST00000422816 654 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 AC019205.3-201ENST00000424573 156 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGCLP35914 AC016700.2-201ENST00000446011 156 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 AC107032.1-201ENST00000485945 480 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 AC104564.1-201ENST00000493028 407 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 AC015911.1-201ENST00000495111 156 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGCLP35914 HMGN1P12-201ENST00000499125 195 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 AC009994.1-201ENST00000606889 253 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 PCGEM1.1-201ENST00000613431 131 ntBASIC1.83□□□□□ -2.12
HMGCLP35914 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGCLP35914 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HMGCLP35914 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGCLP35914 AC009541.1-201ENST00000438279 2662 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGCLP35914 CBX3P1-201ENST00000325243 554 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 Y_RNA.303-201ENST00000364998 94 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 SNORA25B-201ENST00000365507 128 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 SNORA32.2-201ENST00000384049 122 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 SNORA29-201ENST00000384183 140 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 MIR583-201ENST00000384846 75 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 MIR517A-201ENST00000385001 87 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCLP35914 MTND3P9-201ENST00000429526 346 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 HMGN2P3-201ENST00000433603 273 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 HMGN2P5-201ENST00000436882 273 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCLP35914 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGCLP35914 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMGCLP35914 PCMTD1P1-201ENST00000455560 355 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 snoU13.26-201ENST00000459452 105 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCLP35914 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCLP35914 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGCLP35914 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCLP35914 AC034114.1-201ENST00000520293 285 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGCLP35914 AC022616.8-201ENST00000533569 253 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMGCLP35914 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCLP35914 CYP4A27P-201ENST00000567218 190 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 AL355297.2-201ENST00000604792 129 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 AC124303.1-201ENST00000605703 360 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 AC005858.4-201ENST00000623191 700 ntBASIC1.82□□□□□ -2.12
HMGCLP35914 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
HMGCLP35914 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMGCLP35914 snoU2_19.1-201ENST00000362361 80 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 RNU6-593P-201ENST00000364716 112 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 SNORD81.2-201ENST00000365153 76 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 SNORA36A-201ENST00000384221 132 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 MIR9-3-201ENST00000385084 90 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 MIR1294-201ENST00000408503 142 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 MIR1261-201ENST00000408659 82 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 AC012306.1-201ENST00000423267 114 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 AL121890.1-201ENST00000435457 205 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 AL353689.1-201ENST00000438895 199 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 FTH1P25-201ENST00000447665 469 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 AC116337.1-201ENST00000509680 687 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 AL117351.2-201ENST00000513571 157 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 RNU6-567P-201ENST00000516746 107 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 RNU7-30P-201ENST00000516835 62 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 AC233702.2-202ENST00000562547 291 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 MIR3923-201ENST00000579521 83 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 AL355073.2-201ENST00000612106 557 ntBASIC1.81□□□□□ -2.12
HMGCLP35914 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMGCLP35914 Y_RNA.184-201ENST00000363884 108 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 U3.13-201ENST00000364804 214 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGCLP35914 RNU6-611P-201ENST00000384276 104 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 RNU6-876P-201ENST00000391295 104 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 HMGB1P18-201ENST00000438801 619 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AC007215.1-201ENST00000464893 276 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AF186996.7-201ENST00000492781 209 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AC145146.1-201ENST00000496370 254 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AC021146.2-201ENST00000504736 556 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AC026782.1-201ENST00000512952 449 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 Y_RNA.682-201ENST00000516457 100 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 RNA5SP137-201ENST00000516833 135 ntBASIC1.8□□□□□ -2.12
HMGCLP35914 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCLP35914 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms