Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.36□□□□□ -2.03
LRRC53A6NM62 MIR5002-201ENST00000584713 97 ntBASIC2.36□□□□□ -2.03
LRRC53A6NM62 AC022202.1-201ENST00000613515 211 ntBASIC2.36□□□□□ -2.03
LRRC53A6NM62 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LRRC53A6NM62 Y_RNA.67-201ENST00000362870 100 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 RNU4-73P-201ENST00000363164 141 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 RNU6-26P-201ENST00000383985 107 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 NDUFB4P4-201ENST00000404822 243 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 MTCO3P29-201ENST00000432119 779 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRC53A6NM62 Y_RNA.632-201ENST00000459189 102 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC097473.1-201ENST00000508142 408 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 MTND3P22-201ENST00000510932 243 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 RNU6-120P-201ENST00000516077 103 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC034114.1-201ENST00000520293 285 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 AL590705.4-201ENST00000532209 134 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC121758.2-201ENST00000553271 193 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC090517.1-201ENST00000569307 266 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 MIR5690-201ENST00000583739 73 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.35□□□□□ -2.03
LRRC53A6NM62 AC016727.2-201ENST00000603988 621 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 SNORD14A-201ENST00000606526 91 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.35□□□□□ -2.03
LRRC53A6NM62 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LRRC53A6NM62 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.34□□□□□ -2.03
LRRC53A6NM62 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.34□□□□□ -2.03
LRRC53A6NM62 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.03
LRRC53A6NM62 Y_RNA.58-201ENST00000362807 102 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 Y_RNA.154-201ENST00000363624 102 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 RNY3P1-201ENST00000365085 102 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 RNY3-201ENST00000365484 102 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 Y_RNA.405-201ENST00000383979 100 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 Y_RNA.451-201ENST00000384200 100 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 Y_RNA.490-201ENST00000384413 102 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 Y_RNA.524-201ENST00000384564 100 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 Y_RNA.561-201ENST00000384694 100 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 MTCO3P10-201ENST00000455912 772 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 ANXA2P1-201ENST00000505539 926 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 DEFB131C-201ENST00000528817 165 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.34□□□□□ -2.03
LRRC53A6NM62 MIR4795-201ENST00000584182 89 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 AL117336.2-201ENST00000602435 335 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 AC137590.2-201ENST00000619709 240 ntBASIC2.34□□□□□ -2.03
LRRC53A6NM62 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
LRRC53A6NM62 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LRRC53A6NM62 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.34□□□□□ -2.03
LRRC53A6NM62 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 AL136360.1-201ENST00000503377 1900 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 SNORD115-32-201ENST00000364079 82 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 RNU6-611P-201ENST00000384276 104 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 MT-TD-201ENST00000387419 68 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 SNORA12.2-201ENST00000391040 156 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 AC027124.2-201ENST00000428249 105 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 RPL23AP50-201ENST00000434149 455 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 RPL30P15-201ENST00000457129 321 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 Y_RNA.653-201ENST00000459091 95 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 RN7SKP210-201ENST00000459176 261 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 TOMM22P6-201ENST00000465035 409 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 RNU7-175P-201ENST00000515915 61 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 Y_RNA.718-201ENST00000517110 102 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 NDUFA5P6-201ENST00000542110 379 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 AC233702.2-202ENST00000562547 291 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 7SK.7-201ENST00000603504 247 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 RMST_6.1-201ENST00000611980 203 ntBASIC2.33□□□□□ -2.04
LRRC53A6NM62 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.33□□□□□ -2.04
LRRC53A6NM62 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LRRC53A6NM62 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LRRC53A6NM62 RNY1P16-201ENST00000363063 111 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 Y_RNA.259-201ENST00000364619 101 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 RNU6-234P-201ENST00000365229 104 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 SNORA18.2-201ENST00000383865 132 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 RNY4P36-201ENST00000391116 96 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.32□□□□□ -2.04
LRRC53A6NM62 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.32□□□□□ -2.04
LRRC53A6NM62 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 AL035666.1-201ENST00000446195 348 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.32□□□□□ -2.04
LRRC53A6NM62 RNU6-1098P-201ENST00000516772 96 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 AP000889.1-201ENST00000530968 660 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.32□□□□□ -2.04
LRRC53A6NM62 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.32□□□□□ -2.04
LRRC53A6NM62 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.32□□□□□ -2.04
LRRC53A6NM62 AC104581.2-201ENST00000572227 430 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 MIR5701-3-201ENST00000578890 82 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms