Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SDR42E1P4-201ENST00000620894 481 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRT40Q6A162 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
KRT40Q6A162 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
KRT40Q6A162 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRT40Q6A162 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRT40Q6A162 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.35□□□□□ -1.87
KRT40Q6A162 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 RNU1-35P-201ENST00000362782 153 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 SNORA29-201ENST00000384183 140 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 MIR487A-201ENST00000385009 80 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 RNU6-1093P-201ENST00000391194 107 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 RNU6-1203P-201ENST00000410703 110 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 AC009310.1-201ENST00000414414 451 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.35□□□□□ -1.87
KRT40Q6A162 AL353705.4-201ENST00000449661 238 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 RPL26P9-201ENST00000457466 433 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 RNU6-1023P-201ENST00000516137 106 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 RNU6-1012P-201ENST00000516606 109 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 AC021739.1-201ENST00000559631 174 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.35□□□□□ -1.87
KRT40Q6A162 MIR4300-201ENST00000581016 96 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 AL450472.1-202ENST00000637286 180 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 AC000403.1-201ENST00000613696 3585 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 GABRG2-229ENST00000641017 3628 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
KRT40Q6A162 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
KRT40Q6A162 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRT40Q6A162 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
KRT40Q6A162 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.34□□□□□ -1.87
KRT40Q6A162 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.34□□□□□ -1.87
KRT40Q6A162 AC062016.1-201ENST00000355719 319 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 RNU5B-2P-201ENST00000363036 113 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 SNORD115-32-201ENST00000364079 82 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 SNORA9.2-201ENST00000365361 133 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 RNU6-318P-201ENST00000384283 103 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 MIR32-201ENST00000384965 70 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 SNORD115-46-201ENST00000390982 71 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.34□□□□□ -1.87
KRT40Q6A162 AL591034.1-201ENST00000407447 340 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 RNU2-25P-201ENST00000411041 191 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AL451074.5-201ENST00000415894 435 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AC244505.4-201ENST00000434905 287 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AC105272.1-201ENST00000438604 198 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 SSXP5-201ENST00000443473 287 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AC124916.1-201ENST00000444020 547 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 SSXP4-201ENST00000451349 245 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AL109933.2-201ENST00000452651 260 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 MTND4LP30-201ENST00000454092 297 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 RPL21P104-201ENST00000464143 478 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AC087477.1-201ENST00000465747 340 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 RPS26P21-201ENST00000475397 348 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.34□□□□□ -1.87
KRT40Q6A162 Y_RNA.673-201ENST00000516306 88 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AC007375.1-201ENST00000554513 578 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 HMGN2P15-201ENST00000585707 270 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 ELOCP29-201ENST00000588193 334 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AC019159.1-201ENST00000605094 187 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.34□□□□□ -1.87
KRT40Q6A162 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.34□□□□□ -1.87
KRT40Q6A162 AP003122.5-201ENST00000527668 3766 ntBASIC3.34□□□□□ -1.88
KRT40Q6A162 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
KRT40Q6A162 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT40Q6A162 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KRT40Q6A162 CUL1P1-201ENST00000509510 2425 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 MTND5P6-201ENST00000422338 1798 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
KRT40Q6A162 AC110491.1-201ENST00000562191 2010 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 SNORA36A-201ENST00000384221 132 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 U8.10-201ENST00000384260 133 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KRT40Q6A162 RPS4XP3-201ENST00000398541 413 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 AL079342.1-201ENST00000401460 267 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 RNA5SP184-201ENST00000411071 108 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 EIF1P2-201ENST00000428233 350 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 AC010095.1-201ENST00000443543 144 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 RPL39P38-201ENST00000467018 153 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.33□□□□□ -1.88
KRT40Q6A162 AP000870.1-201ENST00000472927 406 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 MED28P2-201ENST00000475771 317 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 RNU1-61P-201ENST00000516107 151 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 AC006199.1-201ENST00000548728 219 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.33□□□□□ -1.88
KRT40Q6A162 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.33□□□□□ -1.88
KRT40Q6A162 AL355877.2-201ENST00000603670 358 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 AC010900.2-201ENST00000604508 210 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 RMST_6.1-201ENST00000611980 203 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 AC011476.5-201ENST00000615594 130 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 AC024581.2-201ENST00000619986 252 ntBASIC3.33□□□□□ -1.88
KRT40Q6A162 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT40Q6A162 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT40Q6A162 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT40Q6A162 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT40Q6A162 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT40Q6A162 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRT40Q6A162 RNU6-212P-201ENST00000362642 104 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms