Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 RNU2-2P-201ENST00000410396 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AL133396.1-201ENST00000432048 687 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 GPM6BP3-201ENST00000442797 145 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AMD1P1-201ENST00000457220 922 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-717P-201ENST00000459076 104 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 RPL9P9-202ENST00000466501 579 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC092989.1-201ENST00000481235 277 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC016632.1-201ENST00000503994 196 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC092436.3-201ENST00000511788 257 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 FAM157A-202ENST00000615155 405 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AL162373.1-201ENST00000620433 407 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC073869.6-201ENST00000640656 341 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC121333.1-201ENST00000567488 2709 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC027514.1-201ENST00000588561 1603 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.1
ATG4BQ9Y4P1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
ATG4BQ9Y4P1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
ATG4BQ9Y4P1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
ATG4BQ9Y4P1 RNU4-15P-201ENST00000362613 141 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.89-201ENST00000363031 102 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 SNORD115-3-201ENST00000363100 82 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.295-201ENST00000364918 102 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 SNORA36A-201ENST00000384221 132 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 RNA5SP465-201ENST00000391195 109 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AP000275.1-201ENST00000411943 390 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 SRIP2-201ENST00000428470 166 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AC025465.4-201ENST00000513422 638 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 MIR449C-201ENST00000516047 92 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AC026371.1-201ENST00000551867 419 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AC078795.3-201ENST00000602913 472 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 AC104458.1-201ENST00000608243 463 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
ATG4BQ9Y4P1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-254P-201ENST00000363377 107 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 SNORD14D-201ENST00000384390 87 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.573-201ENST00000384763 105 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 MTCYBP2-201ENST00000407745 171 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 NDUFA5P4-201ENST00000436704 385 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 U8.21-201ENST00000459536 136 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 UBL5P3-201ENST00000475112 231 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 PTP4A1P4-201ENST00000512479 322 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AL158827.2-201ENST00000602494 330 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC090517.2-201ENST00000614966 680 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC098657.3-201ENST00000620434 263 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AL691447.3-201ENST00000635020 330 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 AC100810.6-201ENST00000638068 285 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
ATG4BQ9Y4P1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.6-201ENST00000362350 114 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-227P-201ENST00000362865 103 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 SNORD113-7-201ENST00000363762 77 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 SNORD32B-201ENST00000364460 84 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-534P-201ENST00000364877 106 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-933P-201ENST00000384424 107 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 821.5 ms