Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC009163.5-201ENST00000575421 637 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC019193.3-201ENST00000609144 554 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.57□□□□□ -2
DDX43Q9NXZ2 AL161423.1-201ENST00000613700 262 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.56□□□□□ -2
DDX43Q9NXZ2 SNORD14B-201ENST00000364533 90 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 RNU6-890P-201ENST00000384121 107 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 RNU6-1179P-201ENST00000384667 107 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 RNU6-1050P-201ENST00000410388 107 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
DDX43Q9NXZ2 UBE2V1P4-201ENST00000425374 344 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 USP9YP30-201ENST00000430729 455 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 RPL7P42-201ENST00000481005 679 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.56□□□□□ -2
DDX43Q9NXZ2 MIR892C-201ENST00000516410 77 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.56□□□□□ -2
DDX43Q9NXZ2 AC011494.1-201ENST00000596454 237 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 RNU6-85P-201ENST00000605989 107 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 AL355802.3-201ENST00000607571 545 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 AC009229.3-201ENST00000608056 282 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 AC046143.2-201ENST00000609789 160 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 AL590808.1-201ENST00000618696 141 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 MIR1291-201ENST00000627649 87 ntBASIC2.56□□□□□ -2
DDX43Q9NXZ2 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 Y_RNA.28-201ENST00000362554 111 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 Y_RNA.148-201ENST00000363557 117 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 RNU6-1059P-201ENST00000363752 98 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 Y_RNA.202-201ENST00000364083 110 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 RNA5SP125-201ENST00000364843 120 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 U8.8-201ENST00000365399 135 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 RNU6-1040P-201ENST00000383974 107 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 RNU6-214P-201ENST00000384130 107 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 RNU6-842P-201ENST00000384269 107 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 RNU6-306P-201ENST00000384617 107 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 SNORA41-201ENST00000384675 132 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 MIR10A-201ENST00000385043 110 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 SNORA75.6-201ENST00000391318 127 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 CYCSP48-201ENST00000417124 323 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC243428.1-201ENST00000421099 264 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC003685.2-201ENST00000422795 395 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.55□□□□□ -2
DDX43Q9NXZ2 SNORA25.11-201ENST00000515935 105 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 Y_RNA.708-201ENST00000516950 96 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.55□□□□□ -2
DDX43Q9NXZ2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.55□□□□□ -2
DDX43Q9NXZ2 SNORD53-201ENST00000579969 78 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.55□□□□□ -2
DDX43Q9NXZ2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX43Q9NXZ2 AC091925.1-201ENST00000623204 462 ntBASIC2.55□□□□□ -2
DDX43Q9NXZ2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DDX43Q9NXZ2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC016717.2-201ENST00000609089 5141 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 RNU6-858P-201ENST00000362436 107 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 Y_RNA.151-201ENST00000363566 112 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 Y_RNA.463-201ENST00000384271 102 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 RNU6-72P-201ENST00000384285 79 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
DDX43Q9NXZ2 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 MIR2053-201ENST00000459295 91 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC112771.1-201ENST00000463581 102 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 MED28P2-201ENST00000475771 317 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
DDX43Q9NXZ2 RNA5SP24-201ENST00000516478 95 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 RNA5SP384-201ENST00000516615 116 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 RNU6-1137P-201ENST00000517073 99 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC069113.1-201ENST00000517763 267 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC104576.1-201ENST00000524225 88 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 AP004607.1-201ENST00000524456 203 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC091544.4-201ENST00000555268 342 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC006504.6-201ENST00000590142 199 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.54□□□□□ -2
DDX43Q9NXZ2 AC016925.2-201ENST00000605108 242 ntBASIC2.54□□□□□ -2
DDX43Q9NXZ2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.54□□□□□ -2
DDX43Q9NXZ2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.54□□□□□ -2
DDX43Q9NXZ2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX43Q9NXZ2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.53□□□□□ -2
DDX43Q9NXZ2 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 SNORD114-30-201ENST00000364448 72 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 Y_RNA.422-201ENST00000384054 114 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 Y_RNA.496-201ENST00000384444 101 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 AL133475.1-201ENST00000404414 305 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 RNU4-53P-201ENST00000410828 140 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 AL035666.1-201ENST00000446195 348 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms