Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.29-201ENST00000362570 113 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 RNU6-486P-201ENST00000363116 107 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.286-201ENST00000364813 102 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 RNU6-1248P-201ENST00000391096 64 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 AC027124.2-201ENST00000428249 105 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 AC103810.1-201ENST00000579873 453 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 MIR5006-201ENST00000583027 110 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 AL162424.1-201ENST00000602325 221 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 AC107294.3-201ENST00000609211 526 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 AL357075.2-201ENST00000614906 189 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 UCA1.1-201ENST00000620952 75 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 AC092435.4-201ENST00000623012 4159 ntBASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM88BA6NKF7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 AC092593.1-201ENST00000515413 1815 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 RNA5SP197-201ENST00000363357 119 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 RNU6-727P-201ENST00000363592 107 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 RNU6-209P-201ENST00000384118 107 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 DBIP2-201ENST00000419076 262 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 AC009237.7-201ENST00000447357 229 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 SNORA81.3-201ENST00000517283 198 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 HSPE1P18-201ENST00000517602 280 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 AL512605.2-201ENST00000592972 256 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 MIR3674-201ENST00000636576 68 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.24□□□□□ -1.73
TMEM88BA6NKF7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 snoU2_19.1-201ENST00000362361 80 ntBASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.269-201ENST00000364685 89 ntBASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.383-201ENST00000383855 97 ntBASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 RNU6-1027P-201ENST00000383998 107 ntBASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 MIR1298-201ENST00000408783 112 ntBASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 AC004386.2-201ENST00000441858 148 ntBASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 VWA8P1-201ENST00000510889 176 ntBASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 RNU6-107P-201ENST00000516643 102 ntBASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.23□□□□□ -1.73
TMEM88BA6NKF7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.83-201ENST00000363005 113 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.136-201ENST00000363444 102 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.297-201ENST00000364950 91 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 RNU6-1264P-201ENST00000383891 107 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 MIR549A-201ENST00000385268 96 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 AC017079.2-201ENST00000416102 485 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 EIF4EP4-201ENST00000424916 578 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 AC024067.1-201ENST00000426199 223 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 Z75741.1-201ENST00000446793 314 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.679-201ENST00000516416 91 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 AC100770.1-201ENST00000532310 322 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 RPL21P7-201ENST00000557463 483 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 AC130289.1-201ENST00000577321 73 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 AC110079.1-202ENST00000635213 138 ntBASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM88BA6NKF7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TMEM88BA6NKF7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.21□□□□□ -1.73
TMEM88BA6NKF7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 AL355596.1-201ENST00000565399 3996 ntBASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 MIR422A-201ENST00000362286 90 ntBASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 SCARNA11.3-201ENST00000517276 130 ntBASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 RPL30P11-203ENST00000598995 310 ntBASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 AC004467.1-201ENST00000615678 330 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms